Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1325 |
Symbol | |
ID | 3766134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1238771 |
End bp | 1240066 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 637797855 |
Product | hypothetical protein |
Protein accession | YP_397820 |
Protein GI | 78779708 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2263] Predicted RNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00779571 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA AATTAAAGGG AAAAGAACTT AATTTAAAAT TAATATATAA AAATAAAAAA ATTACATTCG ACGAACTTTT CAATACGAAA AAAAGACAAT TTAATTTTGA GCTAAATCTA AATGACAATT TCTATAAAGG TAAAGGTATT AGGGGAGATG ATTCAATTTT TATACCATTC TCAAAAGAAA TGGGAGTTAA AATTACTAAA GAAAAGCCTC AAAGAGATGA TTCTATTAAA GAGGCTTTGG AAATGACAAC TCTTATAATG AAGAATAATA TTGAGATATT TCCTAAAATA TTTAGTACAG AATTAGTTGA GAATGAATCC AAAGAAACGT TTTTGATTAC TTTTATGGAG AACATAATAA ATAAGAATAT TTTCAAAATT TTTCTTAAAA GATATAACTC AATAAAAAAC TTTGTCCCCC TTAGAGATTT ACCTTACTTA ATTAAGAATC TAAATATTTA TCCTTATTTT CTTGATAAAT TCTATTATTT TATGGAGGAA TATAACTTAT TTCCTGAAGA CGAATGGTAT AAAAAAACCA ATCTTATAAA TAATAAAATA GTTGACTTTT CTAGATTTAA AATCTTAAAA GAAAGATATC ATTTCCCCTC AAATAAAAAA ACAAAAGCAG AATTATTAGA AGAATATTAT AAACTTAAGA ACATATTTGC CAAGAATTTT AACTCTGAAT ACATCCCTCA ATGGAAAGGT AGCTTATATG AGGGATTTAA GTTCGATAAT GGATTTATAA TGGAAGGCTA TAAATCTGAT CATTATAGGT TTGACTGTTA TAAAAAATTA CCTTTTATAC CTTTTAATAA AATAAAAAAT AAGTCTGTAC TAGATATTGG ATCTAATCAT GGTTTTTTTA GTTTTCAATC AATAATTCAT GGTGCAAAAA ATGTAGTTGC TATAGAACTT GATAGTAAGA ATATTAAAGT TGCAGAGAAA TTAAAAGAAT TAATGAATAT AAGAAATATA GAATTTATTA ATCAAGACGT AACTAATTAC TTATTTGAAA CCAATAATAA TTTTGAATTG ATTATTATGA ATTCAGTATT ACATCAAATT TATAAGAATT ATAAAGGTGC GGATAATTTT CTAAAACAAA TATCGAATAA ATGTAATTAT TTTGTATTTG AAACACCAGT TAATCATCCT ACAGTAAATA TAAAGTTATC ATCAATACAT AAAAAGTTAC GTAAATATTT TTCAACAGTT AGAGTACAAA ATATTTACAA AGCTTATTCA GCTGGATACC GAGCTATTTA TATTTGTTAT AAGTAA
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Protein sequence | MDIKLKGKEL NLKLIYKNKK ITFDELFNTK KRQFNFELNL NDNFYKGKGI RGDDSIFIPF SKEMGVKITK EKPQRDDSIK EALEMTTLIM KNNIEIFPKI FSTELVENES KETFLITFME NIINKNIFKI FLKRYNSIKN FVPLRDLPYL IKNLNIYPYF LDKFYYFMEE YNLFPEDEWY KKTNLINNKI VDFSRFKILK ERYHFPSNKK TKAELLEEYY KLKNIFAKNF NSEYIPQWKG SLYEGFKFDN GFIMEGYKSD HYRFDCYKKL PFIPFNKIKN KSVLDIGSNH GFFSFQSIIH GAKNVVAIEL DSKNIKVAEK LKELMNIRNI EFINQDVTNY LFETNNNFEL IIMNSVLHQI YKNYKGADNF LKQISNKCNY FVFETPVNHP TVNIKLSSIH KKLRKYFSTV RVQNIYKAYS AGYRAIYICY K
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