Gene PMT9312_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1000 
Symbol 
ID3765804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp927790 
End bp928470 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content31% 
IMG OID637797525 
Producthypothetical protein 
Protein accessionYP_397496 
Protein GI78779384 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0358258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTA AAAATATAGT CGCAATTGGG GGAGGTGGAT TTGGAAGATC TTTAGGCTCT 
CTTGAAATTG AGAAATATTT AATTTCTTTA ATTAATAAAA AAAGACCAAA AATATGCTTC 
ATACCTACAG CATCTGGAGA CAGTAGTCTC TATAAACTGA ATTTTTATAG AGCATTTTCT 
AAGCTTGATT GCATAACAAG TCATATAGAT TTTTTCTCAA GAACAGAGAA CTTAGAGGAG 
AAAATTTTAA GTCAAGATAT CATTTATGTT GGAGGAGGGA ATACTAAAAG TATGTTGGCA 
GTTTGGAAAG AATGGAATTT ACATAACATT TTACAAAATG CTTATGAAAA AGGAATTGTA 
ATGAGTGGTG TAAGTGCTGG AGCTATCTGT TGGTTTGATA AGGGTATTAC TGATTCTTTT 
GCAAGAGAAT TGTCTATATT AGATTGCCTA GGGATAGTTA ATGATGTAGC CTGTCCTCAT 
TTTGACGAAG AGAAAGAAAG GGAACCTTAC GTTAATGATG TTATAAGGAG AGAAATTATT 
AAATCGTGTA TTTGTATTGA AGGCAATTGT GCTTTGCATA TAAAAAATGA TGTTGAATAT 
TATTCAATAG ATTTTGGAAA TGGTAAGAAT TGTTTTAGGA TCTCAAAGGA AAATAATAAG 
CTAAAAAAAG AAATCCTCTA A
 
Protein sequence
MNSKNIVAIG GGGFGRSLGS LEIEKYLISL INKKRPKICF IPTASGDSSL YKLNFYRAFS 
KLDCITSHID FFSRTENLEE KILSQDIIYV GGGNTKSMLA VWKEWNLHNI LQNAYEKGIV 
MSGVSAGAIC WFDKGITDSF ARELSILDCL GIVNDVACPH FDEEKEREPY VNDVIRREII 
KSCICIEGNC ALHIKNDVEY YSIDFGNGKN CFRISKENNK LKKEIL