Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0983 |
Symbol | |
ID | 3765787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 917227 |
End bp | 918021 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637797508 |
Product | membrane protein, multidrug efflux associated |
Protein accession | YP_397479 |
Protein GI | 78779367 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.594121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAA GAAAATATCT AAAAGTTTAT AAAAAATTCT TACATACTTC TTTGGCTTCT GAGTTGGAGT ATAAGACAAA TATATTAATT GATTTAATTA CTGCAATTTT AAGTTTAATA GGGAGTATTT TTCTATTATC TATTTTCTTT CAAAGTAATG GATATATTGG AGGGTGGAAA TTTGAACAGG CACTAATAAT TCAAGGTATT TATACAATTT TGAATGGAAT AACTAATACA TGGTTCAATC CAAATCTTAC AGAAATAGTT AAGCATATTA GAGAAGGAAC CTTAGATTTC GTACTTTTAA AGCCTATTGA TAGTCAATTT TTCATTTCCC TAAAAAGAAT TAGTCCATCT GGTTTTTTAG AAATAATGCT TGGATTTTGC TTATTGTTAT ACTGCATCAA AATTAATCAA ATAAATTTAA ATTTAACCTT TCTTTCTCTA TGTTTAATTA CGATAATCTG CTCAATTTGT ATCTTATATA GCTTATGGTT TTTTATTTCA ACAACTACTA TTTGGTTTGT TAAAACATGG AATGCCACAG AAGTATTAAG ATCGTTCCTT TATATTGGAA GATTTCCTTT AAATTCATTT TCATTTTCAT TAAGAATATT TTTTAGTGTT TTCATTCCTA TTGCATTTAT AACTACAATT CCCTCCGAAG TTTTCTTAGG TATTTCTCAA TTATGGAAAA TATTGCTTGA AGTTATTGTT GCTTTAATAT TTTGCTCTAC TTCAAGAAAG TTCTGGTTAT ATGCATTAAA GTTCTACTCT TCGGCATCGA GCTAA
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Protein sequence | MNLRKYLKVY KKFLHTSLAS ELEYKTNILI DLITAILSLI GSIFLLSIFF QSNGYIGGWK FEQALIIQGI YTILNGITNT WFNPNLTEIV KHIREGTLDF VLLKPIDSQF FISLKRISPS GFLEIMLGFC LLLYCIKINQ INLNLTFLSL CLITIICSIC ILYSLWFFIS TTTIWFVKTW NATEVLRSFL YIGRFPLNSF SFSLRIFFSV FIPIAFITTI PSEVFLGISQ LWKILLEVIV ALIFCSTSRK FWLYALKFYS SASS
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