Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0292 |
Symbol | rpsC |
ID | 3764687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 306625 |
End bp | 307350 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | 30S ribosomal protein S3 |
Protein accession | YP_392808 |
Protein GI | 78776493 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00457089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAAA AAGTTAATCC TATTGGTTTA CGTCTTGGTA TCAATCGTAA TTGGGAAAGC AGATGGTTTC CTAACTTTAA GACTGCAGCA GCATACTTAG GTGAAGATCA CAAGATTCGT ACATATTTGA AAAAAGAACT TTACTATGCT GGTGTTTCTA ACATAGTTAT TGAAAGAACA GCAAAAAGAT TACGTGTAAC TATTATTGCT GCTCGTCCTG GTATTATTAT CGGTAAAAAA GGTTCAGATA TCGAAAAGCT TAAAGATACT CTTCAAGCTC TTGTAGGTAA GCCTTTATCA GTAAATATTA AAGAAGAGAA AAAAGCTCAA ATTTCTTCTC AACTTGTTGC AGAAAATGTA GCTACACAGT TAGAGCGCCG TGTTGCATTT AGACGTGCTA TGAAAAAAGT TATGCAAAAT GCACAAAGAG GCGGAGCTAA AGGTATTAAG GTATCTGTGA GTGGTCGTCT TGGTGGAGCT GAAATGGCTC GTACAGAGTG GTATTTAGAG GGACGTGTTC CACTTCATAC ACTTCGTGCA AAAATTGATT ATGGTTTTGC TGAAGCACAC ACTACATACG GTTGTATAGG TGTAAAAGTT TGGATATTTA AAGGTGAAGT TCTCACTAAA GGTATTCCTG CTGAAGTAAA AGAAGAGCAA CAAAAAGAGG GTGCGCGTCG TCCTAAACGT GCTCCTAAAC GTGAAAATAG CGGAAAGGCG GAATAA
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Protein sequence | MGQKVNPIGL RLGINRNWES RWFPNFKTAA AYLGEDHKIR TYLKKELYYA GVSNIVIERT AKRLRVTIIA ARPGIIIGKK GSDIEKLKDT LQALVGKPLS VNIKEEKKAQ ISSQLVAENV ATQLERRVAF RRAMKKVMQN AQRGGAKGIK VSVSGRLGGA EMARTEWYLE GRVPLHTLRA KIDYGFAEAH TTYGCIGVKV WIFKGEVLTK GIPAEVKEEQ QKEGARRPKR APKRENSGKA E
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