Gene Tcr_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1796 
Symbol 
ID3761837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1970615 
End bp1971496 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID637786539 
ProductPfkB 
Protein accessionYP_392062 
Protein GI78486137 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000052274 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTC CTTCTAAAAT TGCCATTTTT GGTGAAGTAC TGTTTGATTG TTTCCCAACA 
GGTGAAAAAG TATTGGGTGG TGCACCCTTT AATATCGCCT GGCATCTTCA GGCATTGGGC
GATTCTCCTA TCTTTATCTC AAGGGTCGGA ACGGATGAAC TGGGTAAAAA GATTATCCTC
AGCGCTCAAG AATGGGGGCT GAAACCAGAC CACATCCAAC TTGACCCAAG CCACCCAACC
GGCCAAGTCG CCATCACGGT TGAAGAAGAT GAACCGCATT ATCTGATTAC GCCTGACTGT
GCTTATGATT TCATTGATCA ACACCTTATT AAGCTGCCCT CTCCGCCCGA TATTCTGTAT
CACGGAACCT TAGCCCTGAG AAATACCGCT TCTCGCCAGG CATTGGATGC CTTAGCGCAA
ACCACAAATG CTCCGCTGTT CTTAGACGTA AACCTTCGAG AACCCTGGTG GCATCAAGAC
GATGTTGAAC AGTGGTTATC CCGAGCCACT TGGGTCAAAC TTAATATTGA AGAACTTAAA
ACACTCGGGT TTTCTGGCGA AACGATTGAA TCGGACATGC GAAGCTTTCA AAAAGAGTTT
GCATTGGAGC AAGTCATTGT CACTCGCGGT GCGCAAGGCA CCATTGTGTT GACTCAAGAA
AACCAGTTTC ACTCTAAAAA ACCGGAGGCG TTAGCGCGTT TCGTCGATAC AGTCGGTGCA
GGCGATGCCT TTACTGCGGT TTACATTCAT GGTCTAATGT CTAAGTGGCC AATTGAAAAA
ACGCTGACCG CGGCACAAGA ATTTGCCAGT CAAGTCATCG GCATCCGGGG CGCCACCTCT
ACCGACCCCG CGTTTTATCA AGAGTTTATT GATACACTTT AG
 
Protein sequence
MTTPSKIAIF GEVLFDCFPT GEKVLGGAPF NIAWHLQALG DSPIFISRVG TDELGKKIIL 
SAQEWGLKPD HIQLDPSHPT GQVAITVEED EPHYLITPDC AYDFIDQHLI KLPSPPDILY
HGTLALRNTA SRQALDALAQ TTNAPLFLDV NLREPWWHQD DVEQWLSRAT WVKLNIEELK
TLGFSGETIE SDMRSFQKEF ALEQVIVTRG AQGTIVLTQE NQFHSKKPEA LARFVDTVGA
GDAFTAVYIH GLMSKWPIEK TLTAAQEFAS QVIGIRGATS TDPAFYQEFI DTL