Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1796 |
Symbol | |
ID | 3761837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1970615 |
End bp | 1971496 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637786539 |
Product | PfkB |
Protein accession | YP_392062 |
Protein GI | 78486137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000052274 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTC CTTCTAAAAT TGCCATTTTT GGTGAAGTAC TGTTTGATTG TTTCCCAACA GGTGAAAAAG TATTGGGTGG TGCACCCTTT AATATCGCCT GGCATCTTCA GGCATTGGGC GATTCTCCTA TCTTTATCTC AAGGGTCGGA ACGGATGAAC TGGGTAAAAA GATTATCCTC AGCGCTCAAG AATGGGGGCT GAAACCAGAC CACATCCAAC TTGACCCAAG CCACCCAACC GGCCAAGTCG CCATCACGGT TGAAGAAGAT GAACCGCATT ATCTGATTAC GCCTGACTGT GCTTATGATT TCATTGATCA ACACCTTATT AAGCTGCCCT CTCCGCCCGA TATTCTGTAT CACGGAACCT TAGCCCTGAG AAATACCGCT TCTCGCCAGG CATTGGATGC CTTAGCGCAA ACCACAAATG CTCCGCTGTT CTTAGACGTA AACCTTCGAG AACCCTGGTG GCATCAAGAC GATGTTGAAC AGTGGTTATC CCGAGCCACT TGGGTCAAAC TTAATATTGA AGAACTTAAA ACACTCGGGT TTTCTGGCGA AACGATTGAA TCGGACATGC GAAGCTTTCA AAAAGAGTTT GCATTGGAGC AAGTCATTGT CACTCGCGGT GCGCAAGGCA CCATTGTGTT GACTCAAGAA AACCAGTTTC ACTCTAAAAA ACCGGAGGCG TTAGCGCGTT TCGTCGATAC AGTCGGTGCA GGCGATGCCT TTACTGCGGT TTACATTCAT GGTCTAATGT CTAAGTGGCC AATTGAAAAA ACGCTGACCG CGGCACAAGA ATTTGCCAGT CAAGTCATCG GCATCCGGGG CGCCACCTCT ACCGACCCCG CGTTTTATCA AGAGTTTATT GATACACTTT AG
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Protein sequence | MTTPSKIAIF GEVLFDCFPT GEKVLGGAPF NIAWHLQALG DSPIFISRVG TDELGKKIIL SAQEWGLKPD HIQLDPSHPT GQVAITVEED EPHYLITPDC AYDFIDQHLI KLPSPPDILY HGTLALRNTA SRQALDALAQ TTNAPLFLDV NLREPWWHQD DVEQWLSRAT WVKLNIEELK TLGFSGETIE SDMRSFQKEF ALEQVIVTRG AQGTIVLTQE NQFHSKKPEA LARFVDTVGA GDAFTAVYIH GLMSKWPIEK TLTAAQEFAS QVIGIRGATS TDPAFYQEFI DTL
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