| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1794 |
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| Symbol | |
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| ID | 3761835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1967592 |
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| End bp | 1969766 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786537 |
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| Product | sucrose-phosphate synthase |
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| Protein accession | YP_392060 |
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| Protein GI | 78486135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0438] Glycosyltransferase
[COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01485] sucrose-6F-phosphate phosphohydrolase
[TIGR02471] sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial
[TIGR02472] sucrose-phosphate synthase, putative, glycosyltransferase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.399032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC AGAACGAACA GGCGAGTCAG TTATACATTG CATTAATCAG TGTGCACGGC
TTAATCCGTG GACAAAATTT GGAATTAGGA CGAGATGCCG ACACCGGCGG ACAAACCCTT
TATGTCCTTG AACTGGCACA AGCATTAGCC AACCATCCTG CGGTGGGCAA AGTTGATTTA
TTTACCCGTC AAGTCATCGA CTCTGCCGTT TCAGAAGAGT ATGCACAACC CATTGAACCC
GTCAGCGATA AGTTCAATAT TGTTCGCATT GCAGCCGGAC CCGATCAATA TATTGCCAAA
GAACGTCTTT GGGACTATCT CGATGCTTAT ACCGATAATA TGATGGATCA TCTGCGGTTA
CAGAAAAAAA TGCCGGACAT TATCCACAGC CATTATGCCG ATGCGGGGTA CGTGGGCTAT
CACTTAGCCA ATCAACTAGC GATTCCGTTG ATTCATACCG GGCATTCCTT AGGGCGTGTA
AAACGAGCAC GCCTGTTGGC GAGTGGCCTC AGCGCCGATG AAATCGAATC CGTCTATAAT
ATGACTCGCC GAATTGATGC GGAAGAAGAA ACCTTGGCCT CGGCTGAAAG AGTGATCACC
AGTACACACC AGGAAATTGA AGAGCAGTAT GAACTGTATG ATTTTTATCA GCCGGAGCAA
ATGAGAGTTG TACCTCCGGG AACCAACTTA AATCATTTTA TGCCGCCCAA AGGCGATGAA
CTCACGTCTG ATCTCTATTT TGATTTGACA AAACACTTAA AAACGCCTGA AAAACCGATT
ATTTTGGCAC TCTCTCGTCC CGATGCTCGC AAAAACATTA CCGCATTAAT TGACGCGTAT
GGCCAGTCCA AACCGTTGCA GGCTCTGGCC AACTTAGTCA TTATTGCCGG TAACCGTGAT
GATATTGACG ATTTAGAAGA TGGCGCACGT CATGTTTTTC ATGACTTATT GGTGGCCATT
GATCGTTACG ACTTATACGG CAAAGTCACC TTGCCTAAAC ATCATCAGCG TGATCAAGTG
CCGTTTATCT ACCGAATTGC CGCCGCCTCT GGCGGGGTGT TTGTCAACCC GGCTTTAACC
GAACCGTTCG GATTGACTTT AATTGAAGCC GCCGCATCCG GCCTGCCAAT TGTCGCCACA
GAAGATGGCG GCCCCAGAGA CATTATCGGC AACTGTGAAA ACGGTATTTT AGTTGACCCG
TTAGAAACCG AAACAATTAC CGATGCGTTG TTGAAGCTGC TTGGCAATCA GAACTTAAAA
CAGACGTATA TCGAGAATGG TTTAAAAGGT GTCTTTACTC ATTATGCCTG GGAAGCACAT
GCCAATACCT ATCTCGACTT GATTTGCCCG ATTGTGAAAG AAAATGAACG TTTAGAACGC
AAGCTTAGCG AACGACGGGC TGAACTGTAT CGAGATCGCG CATTCGTCAC AAGCTTAGAT
CAAAACTTAA TTGGCGATAC GGCCTCTCTG CAAAACCTCA TTCAGCTTTT ACGATCCCAT
CGAAAAACCA CCCTGTTTAT CGTTGCAACT GGGCGACGCT TAGATTCGGC CTTAAGGCTT
CTAAAACATT ATCATATCCC TGAGCCGGAT ATTTTAATCA GCAGTAGCGG AACAGAGATC
AGTTATGCTC CGAAACTGAC AACGGACACG GCTTGGGAAA AACACATTGA TTATCATTGG
ATGCCACATA AGATTCGAAG TATGCTGGAC AAATACCCTG GCTTAAAGAA ACAACCTAAA
AGTGAGCAAA ATCATTTCAA AATCAGCTAC ATCATTGACA CCAGCATGGC AGATGTCGAA
GAAATTAAAC AACTATTGCA TTGGGAAGAG CAGTCCGTCA ATGTACAGCT CTCCTTTGGA
AAGTACCTAG ATATTTTACC GATACGCGCG TCCAAAGGAA TGGCGTTACG CTATGTCGCC
AACCGTTGGC AAATTCCTTT GGACCGTATT TTTGTGGCCG GCGGCTCCGG GTCTGATGAA
GACATGATGC GCGGAAATGC GTTAGCAGCG GTGGTTGCCA ATCGAAACAA AGAGGAATTA
TCACAATTGG TTGATATCGA TCGCATTTAT TTTGCTAAAA AACCTTTTGA AGAAGGTATT
TTGGAAGCAC TGGAATACTA TGATTTCTTT GACAGTTGTA CCGCACCGGA AGAATTTTCA
AGGGAAGCCA ATTAA
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| Protein sequence | MSEQNEQASQ LYIALISVHG LIRGQNLELG RDADTGGQTL YVLELAQALA NHPAVGKVDL
FTRQVIDSAV SEEYAQPIEP VSDKFNIVRI AAGPDQYIAK ERLWDYLDAY TDNMMDHLRL
QKKMPDIIHS HYADAGYVGY HLANQLAIPL IHTGHSLGRV KRARLLASGL SADEIESVYN
MTRRIDAEEE TLASAERVIT STHQEIEEQY ELYDFYQPEQ MRVVPPGTNL NHFMPPKGDE
LTSDLYFDLT KHLKTPEKPI ILALSRPDAR KNITALIDAY GQSKPLQALA NLVIIAGNRD
DIDDLEDGAR HVFHDLLVAI DRYDLYGKVT LPKHHQRDQV PFIYRIAAAS GGVFVNPALT
EPFGLTLIEA AASGLPIVAT EDGGPRDIIG NCENGILVDP LETETITDAL LKLLGNQNLK
QTYIENGLKG VFTHYAWEAH ANTYLDLICP IVKENERLER KLSERRAELY RDRAFVTSLD
QNLIGDTASL QNLIQLLRSH RKTTLFIVAT GRRLDSALRL LKHYHIPEPD ILISSSGTEI
SYAPKLTTDT AWEKHIDYHW MPHKIRSMLD KYPGLKKQPK SEQNHFKISY IIDTSMADVE
EIKQLLHWEE QSVNVQLSFG KYLDILPIRA SKGMALRYVA NRWQIPLDRI FVAGGSGSDE
DMMRGNALAA VVANRNKEEL SQLVDIDRIY FAKKPFEEGI LEALEYYDFF DSCTAPEEFS
REAN
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