| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0943 |
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| Symbol | |
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| ID | 3762040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1016706 |
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| End bp | 1018718 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637785664 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_391212 |
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| Protein GI | 78485287 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000294219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCATC ACACACAGCA TCAACCACAC GCGCATCATG ATCACGACCA GCACCAAGGG
CACTCACCGG GCATGTTTCG AGATAAGTTC TGGATTTCTT TTTGGCTCTC TTTGCCTGTC
ATATTTTGGT CGCCCCACAT TCAAACCCTT TTAGGATACC AAGCACCGCA ATTTCCGGGC
TCCGAATGGG TGGCTCCAAC CCTGTCCACT TTCATTTTCG TCTATGGCGG GATGGTGTTC
TTAAAAGGCG CTTGGCACGA ACTCAAAGCA AGATTACCGG GTATGATGAC GCTCATCTCA
CTTGCGATCC TCGTGGCTTT TATTTTTTCT TGGGTGGTAC AACTTGAAAT CATCAAAGCC
CAGTCGCTTT GGTGGGAACT GGCCACTTTG ATTGTCATTA TGCTGTTGGG TCACTGGATT
GAAATGCGCT CGATTCATCA GGCACAAGGC GCACTGCATC AGCTGGCCAA ATTGCTGCCG
GACACGGCGC TGAAAATTGA TGACTCCGGC GAACATCAAC TCCCGGTAAG TGAATTAAAA
AAAGGTGACA TTATCTTGGT CAAACCAGGT GACCGAGTGC CGGTTGATGG GGTCATTCGT
AAAGGGCAAA GCGATCTGAA TGAATCGATG ATTACCGGCG AGTCTCGCTC GATCAAAAAA
CAAACCGGAG ACGAAATCAT TGCAGGAACC GTTAACGGGT CCGGTTCACT GAGAGTAAAA
GTCACTGGAA CCGGAGACGA CACCAAACTC AGCGGCATTA TGCGTTTTGT GGCCGAAGCC
CAAAAATCAA AATCTCGTGC ACAACATTTG GCAGACCGTG CCGCACAATG GTTGACAGCG
GTCGCCATCG CCAGTGGAGT ATTGACCTTG ATTGTCTGGC AATTTATCGG TGCATCAATC
GACTTCTCCA TCATTCGAGT CGTGACAGTA TTGGTCATTG CTTGCCCACA CGCACTTGGG
TTGGCGATTC CTTTAGTGGT TGCCATCTCA ACGACCTTAG GGGCGCAAAA TGGATTACTA
ATTCGGGACA GACGAGGGTT GGAAGAAGCA CGAAAAATCG ATACCGTTAT CTTTGATAAG
ACAGGGACAC TCACACTCGG TGAATTCCGT GTTGTCAAAA CCACCTTGGC CGACAATGTT
TTGGAAGAGG ATGTACTGAG TATTGCCGCC AGCATCGAGT CCGAATCCGA ACACCCTATT
GCGAAAGGCA TCGTGAAAAC CGCCAACGAA AAAAACTTAC CCCTTCTTGA CGTTGAAAAC
TTCCAAGCCT TAACGGGTAA AGGCGTGACG GCGACCATTT CAGGCGAGAC TTATAAAATG
GGTGGAGCCG CGTTGCTGAA AACGGAAAAT ATTCAATTTC CAGACGCGTT ACTAAAAACT
GCAAAAAATG CCGCTGATAA TGGCCAAACC GCTATTTATC TCATTAAAGA TCTTCATGCA
ATAGCCGTTT TCATCATTGC CGATGCCATT CGAAAGGAAA GCCGCGAAGC CGTGGAGGCA
TTGCACAAAC GTGGCATTGA AGTGGCTATG TTAACGGGAG ATGACTCGGC TGTTGCCAAT
GCCGTCGCGG AATCTCTAGG CATCGACACA GTCTTTTCAG AAGTCCTACC GGAAGATAAG
GCCACCAAAG TACAGGCGTT ACAACAAAAA GGGAAAAAAG TCGCCATGGT GGGCGATGGC
GTAAACGATG CTCCCGCATT GGCCACAGCA GATGTGGGCA TCGCCATCGG TGCCGGCACC
GATGTGGCGG TTGAAGCAGG CCATATTGTA TTAGTGCGTT CAGATCCGCG CGACATTCCT
AAAATCATTT CATTGTCACG AGCGACGTAT CAAAAAATGG TTCAAAACCT TTGGTGGGCC
GCGGGTTACA ACATCTTTGC GATTCCGCTT GCCGCAGGGG CACTCATGTC CTGGGGCATA
CTGCTTTCAC CAGCCGTTGG CGCGATTTTA ATGTCTTTAA GTACGCTGAT TGTTGCTTTA
AATGCGCAAC TTTTGAGACG GGTAAAAATT TAA
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| Protein sequence | MNHHTQHQPH AHHDHDQHQG HSPGMFRDKF WISFWLSLPV IFWSPHIQTL LGYQAPQFPG
SEWVAPTLST FIFVYGGMVF LKGAWHELKA RLPGMMTLIS LAILVAFIFS WVVQLEIIKA
QSLWWELATL IVIMLLGHWI EMRSIHQAQG ALHQLAKLLP DTALKIDDSG EHQLPVSELK
KGDIILVKPG DRVPVDGVIR KGQSDLNESM ITGESRSIKK QTGDEIIAGT VNGSGSLRVK
VTGTGDDTKL SGIMRFVAEA QKSKSRAQHL ADRAAQWLTA VAIASGVLTL IVWQFIGASI
DFSIIRVVTV LVIACPHALG LAIPLVVAIS TTLGAQNGLL IRDRRGLEEA RKIDTVIFDK
TGTLTLGEFR VVKTTLADNV LEEDVLSIAA SIESESEHPI AKGIVKTANE KNLPLLDVEN
FQALTGKGVT ATISGETYKM GGAALLKTEN IQFPDALLKT AKNAADNGQT AIYLIKDLHA
IAVFIIADAI RKESREAVEA LHKRGIEVAM LTGDDSAVAN AVAESLGIDT VFSEVLPEDK
ATKVQALQQK GKKVAMVGDG VNDAPALATA DVGIAIGAGT DVAVEAGHIV LVRSDPRDIP
KIISLSRATY QKMVQNLWWA AGYNIFAIPL AAGALMSWGI LLSPAVGAIL MSLSTLIVAL
NAQLLRRVKI
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