Gene Tcr_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0905 
Symbol 
ID3760450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp982761 
End bp983843 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content43% 
IMG OID637785627 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_391175 
Protein GI78485250 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0340364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACC CTATTAAACA ACACGTCAGC GAGCAGGAAA TTCTGTCAGG CTTAACGACG 
GCCGTTGTTT GGATCGATAA GAATGAGAAC ATCGGTTTTA TTAACCTAGC CGGTGCCGAG
TTGCTGCAAT TGAGTTCGCA AAGAGTCATT GGCATGAATT GGCGTTATAT TCTTCCGAAA
CTACTGGATG ATATTCATGC CTGTGGTACC GGTCGCTTAA CGATTCATGA ATATACGATT
CGATTGCCGG ACGCTCAGAA AATTCATGTA ACGTGCACCA TTTCGTATTA CGAAATGGAT
AATGAGGATG GTTGGTTGAT CGAACTATAC AATACCGAAC GTCATCACAG AATTGCTGAA
GAAGACGAGC GCTGGCATCA ATATGAAGCG GGAAATCTGT TGGTCAGAAC CTTGGCGCAT
GAGATTAAAA ACCCGCTGGC GGGGATTTAT GGCTCGACAC AGTTGTTACA AAAACGATTC
CCTGATAATG ATAAGGCGGA TCAGTTTTTA GAAGTGATTT TAAGAGAAGT CAAACGACTG
CAAAATCTAG TCGACCGTAT GTTGGGGCCA AGAGGAGATT CCGATAAAGA ACCGTTTAAT
ATTCATGAAT TGATCGGTTA CGTCATCGAT GTGATTCGAG GTGAAAAGCC TGAAAATGTC
TTTATTAAGT TGGATTACGA TCCGAGTATT CCTGAAATTT CAATGGATTT TGAAGCCATG
GTGCAAGCGT TGCTGAATTT AGCTAAAAAC GCGATTCAAG CGATGGAAAA ACACGGTGGT
ATTTTAACGT TCAAAACACG GGTTGAATCT AAGTTTACTT TGGGGACTAA GACCTATCCT
TTAGTGGCGG TTATCAGTGT GATCGATGAA GGAGAGGGGA TTCCGCCAGA TGTTTTCGAC
TCCATTTTTT ATCCCATGGT GAGCAGCAAA AAAGACGGTT CTGGATTGGG GTTGTCGGTA
TCACAAAATA TTGTGCGCCA ACATGGTGGG CTGATTGTTG CGAGCAGTGA ACCTGGGAAC
ACCGTGTTTA ATATTTATTT GCCGTTTGAT CACAATCGTA TCGAAGGCAA GCGTCTCCAT
TAA
 
Protein sequence
MTNPIKQHVS EQEILSGLTT AVVWIDKNEN IGFINLAGAE LLQLSSQRVI GMNWRYILPK 
LLDDIHACGT GRLTIHEYTI RLPDAQKIHV TCTISYYEMD NEDGWLIELY NTERHHRIAE
EDERWHQYEA GNLLVRTLAH EIKNPLAGIY GSTQLLQKRF PDNDKADQFL EVILREVKRL
QNLVDRMLGP RGDSDKEPFN IHELIGYVID VIRGEKPENV FIKLDYDPSI PEISMDFEAM
VQALLNLAKN AIQAMEKHGG ILTFKTRVES KFTLGTKTYP LVAVISVIDE GEGIPPDVFD
SIFYPMVSSK KDGSGLGLSV SQNIVRQHGG LIVASSEPGN TVFNIYLPFD HNRIEGKRLH