Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0876 |
Symbol | |
ID | 3760436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 954617 |
End bp | 955834 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785596 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_391146 |
Protein GI | 78485221 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.453625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACAT TGTCCGCTAA ACAGCTTGCG CCCCGATTAG GAGCACTGGT TGCGTTAACC CCTTTTGCTG TTGATACGTA TTTGCCAGCA ATCCCCGAGA TGGCAACCGA CTTGTCATCG ACAGTCAATC ACGTCAGTTT GACAGTTCCG TTGTTTTTAA TCGGATTTGC ACTGGGTCAG TTAATCGGTG GGCCTTTGTC AGATCGCTAT GGACGTAAAC GCATTGCCTT GCTGGGGCTG TTGATCTTTT TTGTCAGTTC TCTGTTGATT ATGTTCTCCA TTCAAATTGA ACAGCTGTAT ATCATGCGAG TGTTGCAAGC CGTGGGGGGT GGTTTTGCCA CGGTGGTTTC GGCGGCGATT GTGCGTGATC TTTACTCCGG TAAAGAAAGT GCCCGGGTGT TTTCCATGAT TGCATTAGTG ATGTTAATTG CCCCTCTGGT GGCGCCTGGC GTGGGAGCTT TTATTGTCAA CCTCAGTGGT TGGCATCAAG TGTTTGCTTT TCTGGCTTTT TATGCGGTGT TGTTGTCTTT TCTTGTAAAG AAAGGGCTGC CTGAAACCGT GACGATTGAG CGAAAACAAA AGATGCGATC TCAACCCTGG TATCAATTTG CATTGAATTA CCGTCAAGTC ATCACGCATT GGCAGGGATT GGGCTTCTTG ATTGCGCAGG GATTTGCGAG CAGCGTTTTA TTTGTTTACA TCACGGAATC CCCTTTTATT TATATGGAAA AGTTTGCAAT TGATTCTGCG TCCTTTCCAT TTTATTTCGG CATTGTTGTG CTCGGGGTTA TGTTTTTCAA TCGGATGAAT TTAGGGTTGT TAAAACGTTT TGAACCGCGT CAAATTGTCT TTTATGCGTT ATTGGCTCAA GTAATCTTAT CTTTTTCTTT GTGGGGCTAT ATTCTGCTGG CCACCGAGTC GGTCTATGTG GTTTTGGTGT TTCAGTTTTT TATTTTAGGC TTGCTTGGCG CGATTACGCC CAATGTGCAG TCTTGTTATA TGGATTACTT TCCTGATTTT TCAGGAACAG CGAATGCATT GATGGGGACG AGTATTTTTG CGTTTGGTGG AATGATGGGG CTAGTGATGG GTGGTTTGCA TAATGGCAGT TTGGAAAGAG TGGTTGAATT TATCCTGTTG CTGTCATCAT TGAGTTGGCT GGTGTTGGTC AAGTTGGCGA AGGTGCGTCT CAGCAAGTTA CACACTTCCG CTTCTTAG
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Protein sequence | MPTLSAKQLA PRLGALVALT PFAVDTYLPA IPEMATDLSS TVNHVSLTVP LFLIGFALGQ LIGGPLSDRY GRKRIALLGL LIFFVSSLLI MFSIQIEQLY IMRVLQAVGG GFATVVSAAI VRDLYSGKES ARVFSMIALV MLIAPLVAPG VGAFIVNLSG WHQVFAFLAF YAVLLSFLVK KGLPETVTIE RKQKMRSQPW YQFALNYRQV ITHWQGLGFL IAQGFASSVL FVYITESPFI YMEKFAIDSA SFPFYFGIVV LGVMFFNRMN LGLLKRFEPR QIVFYALLAQ VILSFSLWGY ILLATESVYV VLVFQFFILG LLGAITPNVQ SCYMDYFPDF SGTANALMGT SIFAFGGMMG LVMGGLHNGS LERVVEFILL LSSLSWLVLV KLAKVRLSKL HTSAS
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