Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0785 |
Symbol | |
ID | 3761709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 859536 |
End bp | 861044 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637785503 |
Product | diguanylate cyclase |
Protein accession | YP_391055 |
Protein GI | 78485130 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAGATC AAAAACCGCT TGTTCAACCG GTTCCTCCTA GGTGGGGTTA CTTCATAGCG ATCGCTTTAG TGGGGGCAAT CGCTTTGTTG TTTCAGTTGG TTTACAGCTT GAAACAAAAC CAGGCCTTGT TTGATACGCA GGTGCAGTAT TTAACAGAAA GTGTTCAGGG CGCGTTTTAT GATTCGGCGA CTAATCTTAA AGATAAGTAT AACTTTCTGT TATTACACTA CAGTCACTTG CAGGATATTA CACGCTTAGT CAATCCTGCT GACAGGCAGG CACTTTATCA GAAAGTTAAA GTGGATTTTG ACGCCATGCA AAAGAAAGAC CCTAGCTTAT TCGTAATGCA TTTTCACTCT CCGAAGAACA TTACGATTTT ACGGGTACAC AATCCCAAAG CGTATGGGGA TGATGTTACA AAAACTCGCC CTATGGTGGT TTATGTCAAT AAGAATCGCC ATCAAGTCAG TGCGTTTGAA GCGGGAAGAA CAGGGCTTTC GTATCGAATC AACACGCCTT TTTTCAGCGA GGGTGGGCAA TATTTAGGTG TTTTGGAAAT CGGTGTCAAG CCGGAATATT TCATCAAGCG ACTTAAAAAT CGGTTTGATG TTCAAGCTCG TTTACTGGTC AAAAAGAGTG CGTTCAAGCA TTTTGAATAT GAACGAGATT ATCCTAAAAT TGGACGCTAC TCCGTCATCT ATTCCGATCC TATATTTAAT GAGATGGATA TCTACAAATC TGAAAAATCG CAGTTGATTC ATAAAGACGG TAAAACGTAT TTAGTTGTTT CGGGCCTGCA TTTGAACTCT TATGACGGTC ACCCACTGGC AGAATTTCAA GTGGTTGAAG ACGTTTCACA TTTTTATCAA AAACACATGC GAAGTTTTTG GTTGCACTGG GTGTTGAACA TTGCCGGCTT GTTGGTTTTT CTAGTCTTAA TGTATTTTAT TCTAAAGCGC TACAGCGACC GCTTGATGAA ATCGATGAAT ACAATCAATG TCTTGCAGCA AAAAAATGAA GCCATGAAAT ACAACAGTGA AATTGATGAG CTGACACAAG CATATAACCG CCGTTACTTT AATCAAAAAT TACGTCAGCT TCTGCATTAC CAGGATAACC GCCATCCAGT TTCCGTGATG TTTTATGATA TTGACTTTTT TAAGCAGATC AATGATACCC ACGGCCATTT AGTCGGCGAT GAAATTTTAA AATCACTGAG TCATTTTATT CGAGGGCATT TACGCTCTGA AGACATTCTG GTGCGCTGGG GCGGTGAAGA GTTTGCGGTT GTTCTAAAAG AAGCGCATTT ACAGCAAGCG GTCGAAAAAG CAGAAGAGCT TCGCCAGGCC GTTGAAGAAA AAACATGGCC GAATGATGTC AAAATGACCA TCAGTATCAG TGTGATTGAG TTACATGAAA ATGATAATCT TAAGTCGTTA CAAGCGCGAC TGGATGATTT GCTCTACAAC GCAAAAGAAT CGGGCCGTAA TCGCGTAGAG CATGAATGA
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Protein sequence | MPDQKPLVQP VPPRWGYFIA IALVGAIALL FQLVYSLKQN QALFDTQVQY LTESVQGAFY DSATNLKDKY NFLLLHYSHL QDITRLVNPA DRQALYQKVK VDFDAMQKKD PSLFVMHFHS PKNITILRVH NPKAYGDDVT KTRPMVVYVN KNRHQVSAFE AGRTGLSYRI NTPFFSEGGQ YLGVLEIGVK PEYFIKRLKN RFDVQARLLV KKSAFKHFEY ERDYPKIGRY SVIYSDPIFN EMDIYKSEKS QLIHKDGKTY LVVSGLHLNS YDGHPLAEFQ VVEDVSHFYQ KHMRSFWLHW VLNIAGLLVF LVLMYFILKR YSDRLMKSMN TINVLQQKNE AMKYNSEIDE LTQAYNRRYF NQKLRQLLHY QDNRHPVSVM FYDIDFFKQI NDTHGHLVGD EILKSLSHFI RGHLRSEDIL VRWGGEEFAV VLKEAHLQQA VEKAEELRQA VEEKTWPNDV KMTISISVIE LHENDNLKSL QARLDDLLYN AKESGRNRVE HE
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