| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0509 |
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| Symbol | |
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| ID | 3761988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 569606 |
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| End bp | 571333 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785220 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_390779 |
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| Protein GI | 78484854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA AAAAAATTAA ATTGGTTTTA TGTTGGCATA TGCACCAGCC TCATTATCGT
GATGGTTTAA ACGGGGAATA CCGTTTACCT TGGGTGTATT TGCATGCAAT TAAAGACTAC
ACCGATATGG TGGCTCACTT AGAAAATCAC TCGAATGCAA AAGTCGTGGT CAATTTTGCC
CCCGTCTTAC TCGAGCAGCT GGAAGATTAC GCAAAACAAA TTCGATCCTG GTTGCAATCA
GGCACACATA TCCAAGATGC CTTGCTGAAT CTATTGTCTG GGGAAACGCC CATTACATCG
GACTTGGAAA CACGGTTTGA AATTGTTCAA GCCTGTCAAA AAGCGTTTGC ACCGACAATG
ATTGACACGT TGCCTCCGTT TAAAAAACTG TTGAGTATGA CGCGTTGTGA TGAGTTGACA
ACAATGGAAG AAGCCGCTTG TTTGGTGTAC TTTAATGAAC AGTTTTTCAT CGATCTATTG
ATGTGGTATC ACCTTGCCTG GATGGGTGAA AGTTTAAGGC AGCAAGATGT TCGGGTTCAA
AAATTGTTGG AAGTTGGCTA CAAGGCGGTT CATTTCACAA ACGAAGATCG CCGACGGATG
CTGGAAGTGA TTGCGGATGC GATTGAAAAT ATTATCCCAC GCTATCGATC TTTGATGGAA
AAAGGACAAA TTGAATTGTC CATGACACCT TATGGGCATC CGATCATTCC TTTGCTGATA
GACTTTAACA GTATGAAAGA TGCGCAGCCA CATGATCCAA TGCCCGCCTC TGAGTGTTAT
CCCGATGGTT ATGAACGCGC AAAATGGCAC ATAGAGCACG GGATGACCGT TTTTGAAGAC
CATTTTGGGG CCAAGCCGAA AGGAATTTGG TTGTCTGAAG GTGCGATTAG TAGCGCCGCG
ATAGGGTTGC TTGATCATTA TGAAATTCAA TGGACGGCTT CTGGGGAAGG CGTGTGGCGT
CATTCCTGTG AAGCATCTCA TCTAGACCAT CACGATATTG CATCAAAACG CGCGTTATAC
CAACCTCTGC AACATGCCTC ACAGGAGTGC GCAATGTTTT TCAGAGATGA TGGCTTATCC
GATTTAATAG GGTTTCAGTA TAAAGATTGG AACCCTCAAG ATGCCGCAAA TAATTTTGCT
CATCATTTAG AAAATATCGC CAACTCTTTA GGAGATCAGG TCGAAGATTA TGTGGTTTCG
GTTATTTTGG ATGGTGAAAA TGCCTGGGAA TATTATTCTG ATAATGGGTA TGACTTTTTG
TCGACGCTTT ACCATACGTT GATTCAGAAC CCACAGATTG AAATGACGAC TTTTTCTGAG
GTTTTAGAAA CGGGTATCCG GCCCAGGCAT CTGCCGGTGT TAAAAGCCGG GAGCTGGGTT
TATGGTTCTT TTTCAACTTG GATTGGAGAG CCGGATAAAA ATGCGGGCTG GGACTTGTTG
GTCGATGCTA AGCTTACTTA TGACAAGGTC ATTGCCTCTG GTAAATTGTC TGCTGAACAA
GAAGCCTTAG CGACAGAGCA GTTAGCGATT TGTGAAGGCT CTGACTGGTT CTGGTGGTTT
GGAGACTACA ACCCTTCTGG CAGTGTTAAA GACTTCGATC AACTTTATCG GCGCCACCTT
GAAAAACTCT TTTTATTACT AGGGGAAAAA CCCCCTGAAC AACTGTCGAT TCCGCTGTCG
TATGGGGGTG GAGACATGGA AAATGCAGGC ACAATGAGAC GCAATTAA
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| Protein sequence | MEQKKIKLVL CWHMHQPHYR DGLNGEYRLP WVYLHAIKDY TDMVAHLENH SNAKVVVNFA
PVLLEQLEDY AKQIRSWLQS GTHIQDALLN LLSGETPITS DLETRFEIVQ ACQKAFAPTM
IDTLPPFKKL LSMTRCDELT TMEEAACLVY FNEQFFIDLL MWYHLAWMGE SLRQQDVRVQ
KLLEVGYKAV HFTNEDRRRM LEVIADAIEN IIPRYRSLME KGQIELSMTP YGHPIIPLLI
DFNSMKDAQP HDPMPASECY PDGYERAKWH IEHGMTVFED HFGAKPKGIW LSEGAISSAA
IGLLDHYEIQ WTASGEGVWR HSCEASHLDH HDIASKRALY QPLQHASQEC AMFFRDDGLS
DLIGFQYKDW NPQDAANNFA HHLENIANSL GDQVEDYVVS VILDGENAWE YYSDNGYDFL
STLYHTLIQN PQIEMTTFSE VLETGIRPRH LPVLKAGSWV YGSFSTWIGE PDKNAGWDLL
VDAKLTYDKV IASGKLSAEQ EALATEQLAI CEGSDWFWWF GDYNPSGSVK DFDQLYRRHL
EKLFLLLGEK PPEQLSIPLS YGGGDMENAG TMRRN
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