Gene Dde_3415 details

Gene Information

• Locus tag: Dde_3415
• ID: 3758392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 3376112
• End bp: 3377995
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637784327
• Product: FtsH-2 peptidase
• Protein accession: YP_389903
• Protein GI: 78358454
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA AAGATCAATG GAACATTGGC TACTGGATCG TCGCCGGCCT GTTGCTGCTG 
ACGCTGCAGA ACTACTGGCA GGCGGCCAAG ACTGTCGAGC CCGTGCCCTA CAGCGAATTC 
GAGAAGGCGC TGGCCGAGGG GCGCGTCGCC GAAGTGTTGG TGTCGGACCG CACGGTCACC 
GGGCGCCTGA AATCGCCGGA CAGCCGGGGC AAGACCACCA TCGTGGCCAC CCGTGTCGAA 
CCCGACCTGG CCGAGCGGCT GTCCAAGTAC GACGTGCCCT ATGCGCGGGT GGTGGAAAGT 
ACCTGGCTGC GTGATGTGCT CTCCTGGATT CTGCCGGCGG TGGCCTTCTT CGGCGTCTGG 
TTCTTCCTGT TCCGCCGCTT CGCCGAGAAG CAGGGTATGG GTGGCTTCCT GAGCATCGGC 
AAGAGCCGTG CCAAGGTATT CATGGAGAAG AACACTGGCG TGACCTTTGC CGATGTCGCT 
GGCGTCGATG AAGCCAAGGC GGATTTGGTT GAGATCGTCG ATTTCCTCAA GAATCCGCAG 
GAGTATGGAC GGCTCGGGGC GCGCATTCCC AAGGGCGTGT TGCTGGCCGG CCCACCGGGC 
ACCGGCAAGA CATTGCTGGC CAAGGCTGTT GCCGGCGAGG CGGCGGTGCC CTTCTTCTCC 
ATCTCCGGAT CAGAGTTTGT CGAGATGTTC GTCGGCGTGG GTGCGGCCCG TGTGCGCGAC 
CTGTTCGAAC AGGCGCGTGT GCAGGCGCCG GCGATCATCT TCATCGATGA GCTGGATGCT 
TTGGGCCGCG CACGCGGTGT CGGAGGACCG ATCGGTGGAC ACGACGAGCG TGAGCAGACG 
CTGAACCAGT TGCTCACCGA AATGGATGGC TTCGACAGCT CGGTCGGGCT GATCATCCTT 
GCAGCCACCA ACCGGCCGGA GATCCTCGAT CAGGCCTTGC TTCGCGCCGG TCGCTTCGAC 
CGTCAGGTGC TGGTGGACCG TCCCGACAAG AAAGGTCGCC TGGATATCCT GAAGGTCCAT 
GTCAAGAAGA TCACCCTGGC CCACGGTGTA GATCTGGAAC AGGTTGCGGC GCTGACCACC 
GGCTTTTCCG GCGCTGATCT GGCCAATCTC GTGAACGAAG CAGCGCTGAA CGCGACGCGG 
CGCAAGGCGC AGGCTGTGGA ACTGCAAGAC TTCACCGCCG CCATCGAGCG CATCGTGGCC 
GGCCTGGAAA GGAAGAACCG TGTGCTCAAT CCGAAGGAGC GGGAAACCGT GGCCTATCAC 
GAGATGGGGC ATGCGCTGGT GGCGCTGGCG CTGCCCGGCA CCGATCCGGT ACACAAGATT 
TCAATCGTTC CGCGTGGCAT CGGTGCACTC GGCTACACCC TGCAGCGGCC CACCGAAGAC 
CGATTTCTGA TGACACGTGC CGACCTGGAG CACAAGATTG CCGTGCTCCT GGGAGGGCGC 
GCGGCTGAGA AGCTCGTGTT CGGCGAGCTG TCCACAGGGG CTTCAGACGA TCTCGCGCGG 
GCCACCGATA TCGCCCGCGA CATGATTACG CGCTTCGGCA TGGATGAGGG CTTGGGGTAC 
GTTGCTTTTG AGGCACAGAG GCCGCGTTTT CTTGATGCGC CTGAACTGGT ACAGGGTGGC 
TGCCGGGTAG CCGAATCGAC TCAGACACGC ATCGACCAAG CCATCCGTGA CATCGTGATG 
GGTGTGTTTG ATCGTGCATA CCGAATTCTC GAAATTAACC GAGAAGTGCT GGAGCGGTGC 
GCGCGCGAAC TGCTCGCACG GGAAACGCTG GATGAATACA GCATCCGGCA ACTGACGCAA 
GGGCTACAGC TCGAATCCCC ATGTCACAGC GGCCCAACTG CCGGAGCCAT TACTTCCTCT 
GTGTCCAAAG GAGCCGCCTC ATGA 

 

Protein sequence

MEKKDQWNIG YWIVAGLLLL TLQNYWQAAK TVEPVPYSEF EKALAEGRVA EVLVSDRTVT 
GRLKSPDSRG KTTIVATRVE PDLAERLSKY DVPYARVVES TWLRDVLSWI LPAVAFFGVW 
FFLFRRFAEK QGMGGFLSIG KSRAKVFMEK NTGVTFADVA GVDEAKADLV EIVDFLKNPQ 
EYGRLGARIP KGVLLAGPPG TGKTLLAKAV AGEAAVPFFS ISGSEFVEMF VGVGAARVRD 
LFEQARVQAP AIIFIDELDA LGRARGVGGP IGGHDEREQT LNQLLTEMDG FDSSVGLIIL 
AATNRPEILD QALLRAGRFD RQVLVDRPDK KGRLDILKVH VKKITLAHGV DLEQVAALTT 
GFSGADLANL VNEAALNATR RKAQAVELQD FTAAIERIVA GLERKNRVLN PKERETVAYH 
EMGHALVALA LPGTDPVHKI SIVPRGIGAL GYTLQRPTED RFLMTRADLE HKIAVLLGGR 
AAEKLVFGEL STGASDDLAR ATDIARDMIT RFGMDEGLGY VAFEAQRPRF LDAPELVQGG 
CRVAESTQTR IDQAIRDIVM GVFDRAYRIL EINREVLERC ARELLARETL DEYSIRQLTQ 
GLQLESPCHS GPTAGAITSS VSKGAAS