| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2116 |
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| Symbol | |
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| ID | 3757124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2165550 |
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| End bp | 2166632 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637783004 |
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| Product | sigma 70 family protein |
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| Protein accession | YP_388608 |
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| Protein GI | 78357159 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000331512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCG CAAAAGATAC CGTAAAAAAG CATACCGCAG CCGCAGCCAC GGACAGCAAC
GCCGCAGAAG ATTCCGCGGC GGAAGTCCTG ACCGGAGACG ACGAAACGAC CTATGATATC
GAAATTGATC AGGAAGAAGA CGATGAAGAT ATCGATATCG ACGAGGGCGA TGTCATCGAC
GTCAGCGATA CGGACCTGCC TGCCCCCCTG CCCCCCGGCA ACAAGCCCAC GCGCGATTCG
CTGCATCTGT ACCTGCGCGA AATAAGCCGT TTTCCCATGC TCAAGCCCGA CGAAGAGTTT
GAGCTTGCAC GGCGGGTACA GCTGCACAAC GACAGTGATG CGGCCTTCCG GCTTGTATCA
TCGCATCTGC GGCTTGTGGT CAAGATTGCC ATGGACTTTC AGCGCCGCTG GATGCAGAAC
GTGCTCGACC TGATACAGGA AGGCAACGTG GGGCTGATGC GTGCCGTCAA CAAGTTTGAC
CCGGACAAGG GCATAAAATT TTCATACTAC GCCGCTTTCT GGATAAAGGC GTATATCCTC
AAGTTCATCA TGGACAACTG GCGGCTGGTC AAAATAGGCA CCACGCAGGC CCAGCGGAAG
CTTTTCTACA ACCTTAACAA AGAACGCCAG AAGCTTATAG CGCAGGGGTA CGACCCCGAT
GCGGCCATGC TTTCCGAGCG GCTGGACGTC ACCACCGAGC AGGTGGTGGA AATGGAGCAG
CGGCTTGACG CTTCGGACAT GTCGCTTGAT GTGCAGGTCG GCGACGAAAA CGGCTCGGCT
TCGCGCATGG ACTTTCTGCC GGCGCTCGGT CCCGGCATTG AAGACACCCT CGCCAACAAC
GAAATCGCGG CAATGGTGCA GGAACGCATC CGGGATATCG TCCCCCTGCT CAATGACAAG
GAGCTGGACA TACTCAACTC GCGCCTGCTT TCGGAAGACC CGGTCACCCT GCGCGAAATA
GGCGAAAAGT ATGATATAAC CCGCGAACGG GTCCGCCAGA TAGAAGCCCG TTTGCTCCAG
AAGATCCGTG ACCACCTGTT CAAGGAAATC AAGGATTTCT CTTCGGACTG GATCACCAGA
TAG
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| Protein sequence | MTPAKDTVKK HTAAAATDSN AAEDSAAEVL TGDDETTYDI EIDQEEDDED IDIDEGDVID
VSDTDLPAPL PPGNKPTRDS LHLYLREISR FPMLKPDEEF ELARRVQLHN DSDAAFRLVS
SHLRLVVKIA MDFQRRWMQN VLDLIQEGNV GLMRAVNKFD PDKGIKFSYY AAFWIKAYIL
KFIMDNWRLV KIGTTQAQRK LFYNLNKERQ KLIAQGYDPD AAMLSERLDV TTEQVVEMEQ
RLDASDMSLD VQVGDENGSA SRMDFLPALG PGIEDTLANN EIAAMVQERI RDIVPLLNDK
ELDILNSRLL SEDPVTLREI GEKYDITRER VRQIEARLLQ KIRDHLFKEI KDFSSDWITR
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