| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1970 |
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| Symbol | |
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| ID | 3756976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2013568 |
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| End bp | 2014734 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637782856 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_388462 |
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| Protein GI | 78357013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0420706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAGT TTACACTCGC TGACCGGCTT GCGACGCTTC CTCCCTATCT TTTCGCACAG
ATAGACAAGG TTAAAGCGGA AGTTGCCGCC CGGGGCGTGG ATATCATCAG CCTTGGCATA
GGCGACCCCG ATATGCCCAC ACCGGACTTC GTCATCGAAG CCCTGAAGAA GGCGGCTGAA
AAACCGGCAA ATCATCAGTA CCCCTCGTAT ACCGGTATGC TGGCTTTCCG TCAGGAAGTG
GCCAACTGGT ACAAGCGGCG GTATGCGGTG GAACTTGACC CGAAAACCGA AGTGCTGACG
CTTATCGGTT CCAAGGAAGG CATTGCGCAT TTTCCCACAG CCTTTGTCAA TCCGGGGGAT
CTGGTACTGG TGTGCCCGCC TTGCTACCCC GTGTACGCCA TTGCTTCCCG CTTTATGGGT
GGGGTGGTGC AGGAACTTCC GCTGTTGGAA GAAAATGATT TCCTGCCCGA TCTCGATGCC
GTTGATGAAG CCACATGGGA AAAAGCCCGC TGCATTTTTG TGAACTATCC CAATAACCCC
ACTGCAGCTA TGGCACCGCG CAGCTTTTTT GAAAAGCTGA TCGGCATTGC CAGAAAGCAT
AATGTTATTG TGGTGCACGA TGCCGCTTAC ACCGAGATGT ATTACAACGA GAACAACCGG
CCTCTTTCCA TTATGGAAAT TCCCGGTGCC ATGGATGTGG CCATAGAGTT CAACTCGCTT
TCCAAGCCCT ACAACATGAC GGGCTGGCGC ATCGCCATGG CAGTGGGTAA TGCCTCTCTG
GTGGCCGGTC TGGGCAAAGT CAAGGAAAAC ATGGACTCGG GCGCTTTTCA GGCCGTTCAG
GAGGCCGCCA TCGTGGCCTT GCGCGACGGT GACGCTTTTC TTGCAGAAAT CCGTGACATT
TACCGCAAGC GTCGCGATAC CGTTATTGCC GCATTGAATA AAATCGGCAT TACCTGCCGT
GTGCCCGAAG CCTCACTTTA TGTTTGGGCC AGAGTGCCCG AAGGTTATAC CTCTTCGGAC
TTTGTGACCC GCGTGTTGCA GGAGACCGGC GTGGTGATGA CACCCGGCAA CGGTTTTGGT
GCGGCAGGCG AAGGGTATTT CCGTATTTCT CTTACAGTCA ATGACGAGCG ACTTGAGGAG
GCCGTATCCC GAATCGCCAG CCTGTAA
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| Protein sequence | MTQFTLADRL ATLPPYLFAQ IDKVKAEVAA RGVDIISLGI GDPDMPTPDF VIEALKKAAE
KPANHQYPSY TGMLAFRQEV ANWYKRRYAV ELDPKTEVLT LIGSKEGIAH FPTAFVNPGD
LVLVCPPCYP VYAIASRFMG GVVQELPLLE ENDFLPDLDA VDEATWEKAR CIFVNYPNNP
TAAMAPRSFF EKLIGIARKH NVIVVHDAAY TEMYYNENNR PLSIMEIPGA MDVAIEFNSL
SKPYNMTGWR IAMAVGNASL VAGLGKVKEN MDSGAFQAVQ EAAIVALRDG DAFLAEIRDI
YRKRRDTVIA ALNKIGITCR VPEASLYVWA RVPEGYTSSD FVTRVLQETG VVMTPGNGFG
AAGEGYFRIS LTVNDERLEE AVSRIASL
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