Gene Dde_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1718 
Symbol 
ID3756716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1776677 
End bp1777792 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content51% 
IMG OID637782598 
Producthypothetical protein 
Protein accessionYP_388210 
Protein GI78356761 
COG category[L] Replication, recombination and repair 
COG ID[COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0679747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTGGT ACTTAGAGCA TCATTTTGAT CCTGATTTCG ACCACATGCA TTTGAAACCC 
CGGGAAACGG AGTCGGGCAA GGTGGACCAC TACAATCTGG GGTACGCCCA GAATGTGGTG
CATGGACAGC TGCTGGCAGA ACTGAAAGAG GTTTCGCAGG AAGAGACCGC CGGACTGGAC
AGCAGATATG TCTATGAAAA GCCGGTACTG CCCTGCGGTC CAAACTGTGC AATTGACCCT
GCCAACAGCC ATGCCATCGT CGCCGCTGCC AACGGATACG TTTTTTATAA CGAAGGGCTG
ATAACCGTAA AAAAGATGCT TAATGTCCGC CGCGATGTGG ACTTTCACAC CGGAAATGTC
GTTTTTGTCA ACGATATCGC AGTACATGGC AGCGTGCGCA CCGGATTTGA AGTGCATGGC
AACAATGTAC TGGTCAAAGG GGTTATCGAA GGTGCCAGAA TACATGCCCG CGGCGCTCTT
GCCAGCGAAA CCGGCGTCAA AGGGCAGAAA AGCGCGCAGT TGTATGCTGC CAAAGCCATC
CGGCTTCCTT TTTGTGAAAA TGCCCAGCTG CGCACGCACG GCAATGTCAT GATTGACACA
TCATGCCTGC ACACTGATGT ATATGTGTCG GGCAGTCTTG TGGTAAAAGA GCGTCTTCAG
GGCGGCACCG TATACACCTC CGGCCTCGTC TATGTTATGG AGCAGCTGGG CGGCGGTCAG
GGAACGCCTA CACAGTTTGT TATGGGCTAC GACCCGTTCC TGTTCAGCAA ACTGCGAGAT
GTGGAAGCAA GCATCAAGAA CCTGAAAAGT AAAGTAGATT CACTGGAAAC GCTGTGCGCC
AAAAGCCCGG AACACCGGAC AGAATTTTCG CCGCTTAAGA ATGAAACCAG CAGAAAATTG
CAGGCCATGC ACCGCATCCG CACGGAAATT TGGGAAAAAT TTGACGCACA GGACGTGCCA
CCCGGCTGCA GAATACTGGT TCCGGGAAAA GTGCGCCCCG GCGTTGAAAT CAGCATCGGC
AGAGCATTTC TGAAGGTAAA TGACTATCTG GAAGATGTTC GTTTCTGCCT TGAAAATGAA
GAAATTGTAA TTCACTCACC TGCTGTGGAT AAGTAA
 
Protein sequence
MPWYLEHHFD PDFDHMHLKP RETESGKVDH YNLGYAQNVV HGQLLAELKE VSQEETAGLD 
SRYVYEKPVL PCGPNCAIDP ANSHAIVAAA NGYVFYNEGL ITVKKMLNVR RDVDFHTGNV
VFVNDIAVHG SVRTGFEVHG NNVLVKGVIE GARIHARGAL ASETGVKGQK SAQLYAAKAI
RLPFCENAQL RTHGNVMIDT SCLHTDVYVS GSLVVKERLQ GGTVYTSGLV YVMEQLGGGQ
GTPTQFVMGY DPFLFSKLRD VEASIKNLKS KVDSLETLCA KSPEHRTEFS PLKNETSRKL
QAMHRIRTEI WEKFDAQDVP PGCRILVPGK VRPGVEISIG RAFLKVNDYL EDVRFCLENE
EIVIHSPAVD K