| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1611 |
|---|
| Symbol | |
|---|
| ID | 3755038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1659190 |
|---|
| End bp | 1660089 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637782490 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_388103 |
|---|
| Protein GI | 78356654 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAG AGAGAGTATG TTCAAAGGTT GAAACAACCG GCTTCAGTAA TTTTTCTTTG
ACTACCTTTT GCCAGCGCAC AGGGCGGGGC AGAGACATTT CTTTTTCTTA CGTTCAGCAG
GACGGCATGC TGGATGTCGG CTTTTGTGTA AGCGGGTCGT GGCATGTGCT TCTGGGGGGG
CGCAAATTGA GTACCGGCAA GGGCAATGTC GGCATGTTCC ATCTGCCCGG CGATTCGTGG
CAGAGCCTCT ATCCGCCCGA TACATGCATT CAGGGCGTGG GAATTTCGGT GCGTATTGAT
GCACTGCGCT CAATGTTTGA GGATGAACCG GTTACACACG AAGGGTTGAA CCGGCTGCTC
AGAGGCGGTG CCGATGCCAC TGTTCTTGAA TTCGGCCAGA TGACGGCGCA GGAAATGGAA
GGCGTGAAAC AGGTGCTGAT GGCCGGCTCT GTGGACGCTT TACGCAAGCT CTTTCTGGAA
GCGAAAACCA TAGAGCTGCT GCACAGCTTT CTTGTGGCCC GCAATGCGCA GGGCAGAAAG
CCGTTAACTG TGGCGGAAAT AAGAAAAATG GCCAGTGCGG TGGAGATTAT TGCTGAAGAT
CTGGAGGATC CGCCATGCAT TTCCGGACTA GCAAGCCGGC TGGGCATGAG TGCAAGCAAG
CTGAAATCCT GCTTCAAAGA ATATACCGGT GACTCTGTTT ATTCGTATAT AAAGAAAAAA
CGTCTGGAAA ATGCCAGACG GTGCATCGAA TCAGGCGAGA TGAACGTCAC TGAAGCTGCT
GTCAGTGTGG GGTATAGCAG TCTCGGGCAC TTCAGCCGGA TCTTTAAAGA GAATTTCGGC
GTATTGCCCA AAGATGTGTC AAAAGGCCGG TACTGCCTGC GTCACACTGC AGGCATGTGA
|
|---|
| Protein sequence | MIQERVCSKV ETTGFSNFSL TTFCQRTGRG RDISFSYVQQ DGMLDVGFCV SGSWHVLLGG
RKLSTGKGNV GMFHLPGDSW QSLYPPDTCI QGVGISVRID ALRSMFEDEP VTHEGLNRLL
RGGADATVLE FGQMTAQEME GVKQVLMAGS VDALRKLFLE AKTIELLHSF LVARNAQGRK
PLTVAEIRKM ASAVEIIAED LEDPPCISGL ASRLGMSASK LKSCFKEYTG DSVYSYIKKK
RLENARRCIE SGEMNVTEAA VSVGYSSLGH FSRIFKENFG VLPKDVSKGR YCLRHTAGM
|
|---|
| |