| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1533 |
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| Symbol | |
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| ID | 3756011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1551395 |
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| End bp | 1553239 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782410 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_388025 |
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| Protein GI | 78356576 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.445026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACAA TCGTAAACGA AAAGCTGCGT AACGTAGCTA TCATTGCCCA CGTTGACCAC
GGTAAAACAA CCATGGTCGA CGCCATGTTC CGTCAGGCCG GACTGTTCCG CTCCGATCAG
GAAGTTCAGG ATCGCATAAT GGACAGCATG GATCTTGAAC GTGAACGCGG CATTACCATT
GCAGCCAAAA ACTGCGCCGT GAACTGGAAG GGCACAAAGA TCAACATAAT CGACACCCCC
GGTCACGCCG ACTTCGGCGG CGAGGTGGAG CGGTCTCTTT CCATGGCCAC AGGTGCCATC
CTGCTGGTCG ATGCTTCTGA AGGCCCCCTG CCCCAGACCC GCTTTGTGCT CAAAAAAACG
CTGGAGGCGG GACTCAAGGT CATCGTGGTC ATTAACAAGA TCGACCGTAA AGACGCCCGC
GTGGAAGAAG TGCTCAACGA AGTGTACGAC CTGTTCATCG ATCTTGACGC CAGCGAAGAG
CAGATAGAAT TTCCGGTGCT GTACGCCATC GGCCGGGACG GCGTGGCCAT GCGCGACCCG
CAGGATCCGC GGCAGGATCT CACCCCGCTT TTTGAAACCA TCCTCGAGGT CATTCCCGGC
CCGGCGCACA ATCCCGAAGA ACCCTTCCAG ATGCTTGTTT CCGACCTTGC CTACTCCGAC
TATCTGGGCA GACTGGCTGT GGGCCGCATC ATACACGGAA CGGCTCAGGC CAAAGAAGAA
ATGCTCTGCG TGGGTGAAAA GGAAAACCAG ACCCTGCGTG CCACCAAGCT GCAGGTGTAC
GACGGGCTTT CGCTCAGCGA AGTGCAGTCT GCCGAAGCCG GCGACATTCT GGTGCTGGCC
GGTATTGAAG ACGTGACCAT AGGCGACACC ATCTGCACCA AAGCCGCCCC CCGCAAGCTC
AAGCGTATTC ACGTGGACGA GCCGACGGTG GCCATGCGTT TTTCCATCAA CAGCTCGCCC
CTTGCCGGCC GCGAAGGAAA AATTGTCCAG TCCCGTAAAA TCGGCGAGCG GCTCTTCAAG
GAAATGCTGC GCAACGTGGC CATCCGCGTG GAAGAAACCG ACGACAAGGA CAGCTACCTT
GTGAAAGGCC GCGGCGAATT CCAGATGGCC ATACTCATCG AAACCATGCG CCGTGAAGGA
TTTGAACTCA ATGTGGGCCG TCCGGAAGTT ATCTTCAAAA AAGACGGCAA CACACTGGTG
GAACCCATCG AACGCCTGTG GGTGGACTGC GACGAACCCT TTATGGGAGT TGTCACTGAA
AAACTTTCCA CCCGTAAAGG CCGCATGGTC AACCTGATCA ACAACGGCAC CGGCCGTGTG
CGTATGGAAT TCAGCATTCC TTCGCGCGGG CTCATCGGCT ACCGTGATGA ATTTCTCACG
GACACCAAGG GTACCGGCAT CATGAACTCG TATCTTGACG GATACGAACC GCACCGCGGC
GATTTTCCCA CCCGCTATAC CGGTTCCATT GTGGCCGACC GTGCGGGCAC CACTGTTGCC
TACGGTCTGT ACAACCTGGA ACCGCGCGGC CGTCTTTTTG TGGGTGCGGG CGAACCGTGC
TATGAAGGCA TGGTTGTGGG TGAACACAAC CGCGATAACG ACATCGATGT GAACCCCACC
AAAGAAAAGA AACTGACCAA CATGCGTGCT TCCGGCAAAG ATGAAAACGT GGTGCTTACT
CCCGTCAAAC CCATGACGCT GGAACAGGCA CTGCACTTTG TGCGTGATGA CGAACTGGTC
GAAGTCACCC CCGTATCCAT CAGAATCCGC AAGGCGGAAC TCTCGGCACA AAAGCGGCAC
GCCGCTCAGG GGGCCAAGAA AAAAGCCTCG TTGCTGAAAA AATAA
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| Protein sequence | MTTIVNEKLR NVAIIAHVDH GKTTMVDAMF RQAGLFRSDQ EVQDRIMDSM DLERERGITI
AAKNCAVNWK GTKINIIDTP GHADFGGEVE RSLSMATGAI LLVDASEGPL PQTRFVLKKT
LEAGLKVIVV INKIDRKDAR VEEVLNEVYD LFIDLDASEE QIEFPVLYAI GRDGVAMRDP
QDPRQDLTPL FETILEVIPG PAHNPEEPFQ MLVSDLAYSD YLGRLAVGRI IHGTAQAKEE
MLCVGEKENQ TLRATKLQVY DGLSLSEVQS AEAGDILVLA GIEDVTIGDT ICTKAAPRKL
KRIHVDEPTV AMRFSINSSP LAGREGKIVQ SRKIGERLFK EMLRNVAIRV EETDDKDSYL
VKGRGEFQMA ILIETMRREG FELNVGRPEV IFKKDGNTLV EPIERLWVDC DEPFMGVVTE
KLSTRKGRMV NLINNGTGRV RMEFSIPSRG LIGYRDEFLT DTKGTGIMNS YLDGYEPHRG
DFPTRYTGSI VADRAGTTVA YGLYNLEPRG RLFVGAGEPC YEGMVVGEHN RDNDIDVNPT
KEKKLTNMRA SGKDENVVLT PVKPMTLEQA LHFVRDDELV EVTPVSIRIR KAELSAQKRH
AAQGAKKKAS LLKK
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