Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0693 |
Symbol | |
ID | 3755843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 706666 |
End bp | 708489 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637781558 |
Product | TrkA domain-containing protein |
Protein accession | YP_387189 |
Protein GI | 78355740 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00166729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAA CCTTCATGTC CCCGCAGGTG CTCGCCGTCA CGGCAATTCT GATTCTGGCC CTGTACTTCC TTGTCACGGA AAAATGGCCC CTGCCGCTCA CCGCTCTGGG CATCATCGTC GGTCTGTGTC TTGCCGAGGC GCTGGTAGGC GGCATCCTGT CCTTCAGCAA TATTTTCGGT TCGTTCGGCA GCCGCGGTCC TCTGGCGGTG GCCATGCTGT TCATTGTCAG CCGGGGGCTC ATACGCTCCG GGGCACTGTC ATTCGTGGTC AATCTGGCCG CGCGGCTTAC AGGCGGCAAA CCGCTGCGGC TGATGATATT CATGGTCACC ACGGTCATCA CGCTGTCCGC ATTCCTGAAC AACACCCCCG TGGTCATTCT GTTCATCTCC ATCATCCTCA TGCTGTGCGA ACGCTTCCGC CTCGTACCCT CCAAGTTCAT GATCCCGCTG TCCTTCGCGT CCATTCTGGG CGGCACGTGT ACGCTTATCG GTACTTCCAC CAACATCATT CTTTCCGACA TGATGGTGCT GAACAAGCAG GCCCCGCTGG GCATGTTCGA ACTGGCCGTG GTAGGTGTGC CGCTGGCCAT CATCGGCGGG CTGTTCCTTA TATTTGTGGC TCCGCGGCTG CTGCCGGAAC GCAAGTCGAC ATTCATCTCC AGCGGCGAAC AGCAGGAAAA CCTGTACCTT TCCGAAGTGG TGGTGCCCGA AGGCAGCCCG CTGGCGGGGG TGAAAATAAG CGAAGCCTCC TCTGTACTGG GCAGTTCGGG CAGTGTTGTG GAACAGAGCA GACAGGGTGA AATGCTTTAT CTGCCCGGCA GGGAGGATCA GATTATATAC GCGGGCGACC TGCTTGTGGT CAGCAGCCCG CTGGATACTC TGACATCGCT GCTTGCCAGC CGCATCATCG TGCTGCGCCA CGGCGGCGAC CTGTTCCTTT CCGGCCCCAG CGACGCGCGC CCCATAGCGG AACTTATCGT ACCGCCCGCA TCGCGGGTAC GCGGCCGCAG GCTTTGGAAC ACCGCCCCCG GGCGCGACGA AAACATCACA GTTATCGGCG TACGCCACAA GGAAGGGCAC TACGCATGGC AGAAGACCAG CCAGCTGCGA CTGGCAGCCG GTGACACCCT GCTGGTACAG GGCACCCGCG CAGCCATGGA CTCGCTGGCA TCGGACGGCG ATTTCATCAT CATGGAAGAA GCCGGTCAGA AGATTCACTA CTCCAACAAG GCACCTCTGG CGCTGGGCCT GTTCCTTGCC ATGGTTGTGG TTGCCTCTGT GGGCATCATG GGCATTCTGC CCGCGGCCAC CATCGCGGCT TTCCTTATGA TTCTCACACG CTGCGTCAAC CTGAAGGAAA GCTTCCGTTC GCTGGACGGT GAAGTGCTGC TGCTCATCAT CGCCACCATA TCGCTGGGCA AGGCCCTTTC GCAGACAGGT GCGGCAGATG TTTACGCCCA CGCCTTCCTT ACCCCCTTTG AAGGCGTATC GGCGCGGTTC ATCCTTCTGG CCGTAGTCAC ACTGACCGCG CTTATCACCA ACTTTCTTTC CAACAACTCG GCTGCGGCGC TGCTTACACC CGTTGCCGTT TCCATAGGTA TGGAGCTGGG AGTCGACCCC CGCGCGTTTC TTATAGGCAT CGCTCTGGGT GCATCGGCAT GCTATCTGAC GCCCATCGGC TATCAGACCA ACCTGCTGGT ATACGCCCCC GGCGGCTACA AGTTTTCGGA CTTCATGCGC GTGGGGCTGC CCATGACCCT GCTGGTCATC GTGCTGGCCA CTGTCATGAT TCCCATGTTC TTCCCCTTTA CGCCCCTGCA GTAG
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Protein sequence | MEATFMSPQV LAVTAILILA LYFLVTEKWP LPLTALGIIV GLCLAEALVG GILSFSNIFG SFGSRGPLAV AMLFIVSRGL IRSGALSFVV NLAARLTGGK PLRLMIFMVT TVITLSAFLN NTPVVILFIS IILMLCERFR LVPSKFMIPL SFASILGGTC TLIGTSTNII LSDMMVLNKQ APLGMFELAV VGVPLAIIGG LFLIFVAPRL LPERKSTFIS SGEQQENLYL SEVVVPEGSP LAGVKISEAS SVLGSSGSVV EQSRQGEMLY LPGREDQIIY AGDLLVVSSP LDTLTSLLAS RIIVLRHGGD LFLSGPSDAR PIAELIVPPA SRVRGRRLWN TAPGRDENIT VIGVRHKEGH YAWQKTSQLR LAAGDTLLVQ GTRAAMDSLA SDGDFIIMEE AGQKIHYSNK APLALGLFLA MVVVASVGIM GILPAATIAA FLMILTRCVN LKESFRSLDG EVLLLIIATI SLGKALSQTG AADVYAHAFL TPFEGVSARF ILLAVVTLTA LITNFLSNNS AAALLTPVAV SIGMELGVDP RAFLIGIALG ASACYLTPIG YQTNLLVYAP GGYKFSDFMR VGLPMTLLVI VLATVMIPMF FPFTPLQ
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