Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0506 |
Symbol | |
ID | 3756529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 513506 |
End bp | 514798 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637781366 |
Product | hypothetical protein |
Protein accession | YP_387002 |
Protein GI | 78355553 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.912527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGCG TTTATTCGAT AAGTCTCGGC TGTCCCAAGA ACCGCGTGGA CACCGAGTGG CTGCTGGGCG TGCTGGGGCC GGAGGTCCGA CCCGTCCGGG AGATGGCGGA TGCCGACCTT GTACTCATCA ATACCTGCGG GTTCATTGCT CCGGCGGTGG AAGAGTCTGT CCGGACGGTG GTCGAGGCCG TGGCCGAACT GGAAGACCTG CCCCGCAGGC CGCTGCTGGC TGTGGCCGGC TGTCTGGTGG GCCGGTACGG CCGGCAGGAC CTGGCCGCAG AACTGCCCGA GGTTGATCTG TGGCTGACCA ACAGAGATAT GGATGCATGG CCGGAGATGA TAGGCCGCGC GCTGGGAGTT GCGGTGCATG TGCCGCCGGT GCGTCTGCTT TCCACCGGTC CGTCATATGC CTACCTCAAG GTCAGCGACG GCTGCGGCCA TAACTGTTCT TTCTGCACCA TACCTTCCAT CCGCGGCGGG CTGGTGTCCA CTCCGGCCGA CGTGCTGGAA GCGGAGGCCG TCAACCTGCT TTCCCGCGGG GTGAAGGAGC TGATATTTGT GGCGCAGGAT GTTGCCGCCT ACGGCAGAGA CATGGGACTC AGGCACGGTC TGCGTTCGCT GCTGGACAGG CTGCTGCCGC TGGACGGGCT GGAACGGCTG CGGCTCATGT ATCTGTATCC TGCCGGTCTT GATGCCGGTC TGCTCCGTTA TCTGCGTGAT GCGGGCAAAC CTTTTGTGCC GTATTTTGAT ATTCCCGTGC AGCACGCCCA TCCTGATGTG CTGTCGCGCA TGGGACGTCC TTTTGCCCGC AACCCGCGCG AGGTGGTGGA CCGCGTGCGC GATGTCTTTC CCGAAGCGGC GCTGCGCACG TCCATCATAG TGGGCTTTCC CGGTGAGACA CAGCAGCACT ACGACCATCT GACGCGCTTT GTGCAGGATG TGCGTTTTAT GCATCTGGGC GTGTTTGCCT ATCGTGCCGA AGAAGGCACC CCCGCAGCCG GCATGCCCGG TCAGGTGGAT GAAGTGGAAA AAGACTGGCG CCGCGATGCC CTGATGGAAG TGCAGGCAGA GATAAGCGAA GAAATTCTGG AAGGGTTTAC CGGCAGCGAC GAAGACGTGC TGGTGGACGC CGCGCACGAG GAGTGGCCGG GGCTGCATGT GGGCCGCACA TGGTTTCAGG CACCGGAAAT TGACGGCGTG ACCTACATAA GCGGACCGGG GGTGAAACCC GGAGCCATGG TGCGTGCCGA GATAGTGGAA TCGCGGACCT ATGATCTTGT GGCACTCTCA TAA
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Protein sequence | MISVYSISLG CPKNRVDTEW LLGVLGPEVR PVREMADADL VLINTCGFIA PAVEESVRTV VEAVAELEDL PRRPLLAVAG CLVGRYGRQD LAAELPEVDL WLTNRDMDAW PEMIGRALGV AVHVPPVRLL STGPSYAYLK VSDGCGHNCS FCTIPSIRGG LVSTPADVLE AEAVNLLSRG VKELIFVAQD VAAYGRDMGL RHGLRSLLDR LLPLDGLERL RLMYLYPAGL DAGLLRYLRD AGKPFVPYFD IPVQHAHPDV LSRMGRPFAR NPREVVDRVR DVFPEAALRT SIIVGFPGET QQHYDHLTRF VQDVRFMHLG VFAYRAEEGT PAAGMPGQVD EVEKDWRRDA LMEVQAEISE EILEGFTGSD EDVLVDAAHE EWPGLHVGRT WFQAPEIDGV TYISGPGVKP GAMVRAEIVE SRTYDLVALS
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