| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3402 |
|---|
| Symbol | |
|---|
| ID | 3741180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3817052 |
|---|
| End bp | 3818056 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637780692 |
|---|
| Product | thiamine biosynthesis protein |
|---|
| Protein accession | YP_386339 |
|---|
| Protein GI | 78224592 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AAGCCCTCGC CCTCCTCTCC GGGGGGCTCG ACTCTACCCT TGCGGTCAAG
GTGATGCTTG AGCAGGGGAT CGAGGTCGAA GCCCTCAATT TCACCTCCCC CTTCTGTACC
TGTACCGGAA AAAACGCGGG ATGCAAATCG GAAGCGATCC GGGTGGCCGA AGAGTTCGGC
ATCCCCATCA AGGTGATGCA CAAGGGTGTC GACTACCTGG AGGTGGTCAG AAAGCCCAAA
CACGGCTACG GCAAGGGGAT GAACCCCTGC ATCGACTGCC GGATCTTCCT CTTGCGCAAG
GCAAAAGAGT ACTTAGAAGA AAGCGGCGCC GACTTCGTCA TCACCGGCGA GGTGCTGGGG
CAGCGCCCCA TGAGCCAGCG CCGCCACACC CTCGACATCA TCGAGCGGGA GAGCGGCCTG
GCGGGACGGC TCCTGCGCCC CCTGTCGGCC AAGCACTTCG AACCGACCCT CCCCGAGCAG
GAAGGGTGGG TGGACCGGGA GAAGCTCCTG GCCATCCAGG GACGCTCCCG CAAGGAGCAG
ATGCAGCTGG CCGAAGAGCT GGACGTGAAG AACTACCCCT GCCCCGCGGG GGGGTGCCTC
CTGACCGAGG TCTCCTTTGT CTCCAAGGTG AGGGACGTGT TCGATCACTC GGACCAGCTG
AACCTGCGGG ATTTCCGCCT CCTCAAGGTT GCGCGCCACT TCCGGGTCGG CCCCCGCACT
AAGGTCCTCA TCGGCCGCAA CGAAGCGGAG AACGAGCTCC TCTCCCACAA CATCCAGCCG
GGAGAGGCGA CGCTCCGCTG GCTCGACGGA TCGAGCCCCC TGGGGGTCCT CATGGGGGTC
GTGGACGACG CGCTTCTGGA GACCTCCGCG AAGATACTCC TGCGCTACAC CCGGGCCGAA
GCGGGGGCTG AGTGCCGGGT GAAAGTGGTG ATCGACGACA ACGAGCGAAT TATTGTCGTC
CCTAACGAGT TCTCGGACCC GGCCATCGAG AGTTACCGCG TGTAG
|
|---|
| Protein sequence | MKRKALALLS GGLDSTLAVK VMLEQGIEVE ALNFTSPFCT CTGKNAGCKS EAIRVAEEFG
IPIKVMHKGV DYLEVVRKPK HGYGKGMNPC IDCRIFLLRK AKEYLEESGA DFVITGEVLG
QRPMSQRRHT LDIIERESGL AGRLLRPLSA KHFEPTLPEQ EGWVDREKLL AIQGRSRKEQ
MQLAEELDVK NYPCPAGGCL LTEVSFVSKV RDVFDHSDQL NLRDFRLLKV ARHFRVGPRT
KVLIGRNEAE NELLSHNIQP GEATLRWLDG SSPLGVLMGV VDDALLETSA KILLRYTRAE
AGAECRVKVV IDDNERIIVV PNEFSDPAIE SYRV
|
|---|
| |