| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0625 |
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| Symbol | rpsJ |
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| ID | 3739248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 699984 |
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| End bp | 700292 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637777903 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_383592 |
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| Protein GI | 78221845 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0000558853 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000000000328358 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAAGTC AAAAAATAAG AATCCGCCTT AAAGCTTTTG ATCATAAGCT TCTTGATCAA
TCAGTAGGTG AGATAGTCGA TACTGCAAAA AGAACAGGTG CGCGGGTTGC TGGGCCAATC
CCTCTCCCGA CGATAATCAA TAAGTATTGC GTCCTCCGGG GACCGCACGT GGACAAGAAG
TCTCGAGAGC AGTTCGAAAT CCGGACACAT AAACGTCTCA TCGATATTCT TGATCCAACA
CAGCAGACTG TCGACGCTCT CATGAAGCTT GATCTCTCTG CAGGCGTAGA TGTTGAAATC
AAGCTCTAA
|
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| Protein sequence | MPSQKIRIRL KAFDHKLLDQ SVGEIVDTAK RTGARVAGPI PLPTIINKYC VLRGPHVDKK
SREQFEIRTH KRLIDILDPT QQTVDALMKL DLSAGVDVEI KL
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