Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0394 |
Symbol | |
ID | 3739372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 435368 |
End bp | 437134 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637777667 |
Product | DNA primase |
Protein accession | YP_383362 |
Protein GI | 78221615 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGA TCCCCGACGA TAAGATCAGG GAGGTCCGGG AGCGGGCCTC GATTCTGGAC GTGGTGTCCG ACTACGTGAG CCTCCGGAAG TCGGGAGCCA ACTACCAGGG GCTTTGCCCC TTCCATGGCG AGAAGACCCC TTCCTTCAAC GTGAATCCGG CCCGGGGGAT CTTCCACTGC TTCGGTTGCG GCGTGGGGGG GAATGCGATT ACGTTCATCG CCAGGATGGA GGGGCTCTCG TTCCCCGAGG CGGTGAAGTT TCTTGCCAAG CGGGTGGGGG TTGAGATCGA GGATCGTCCC GTATCCGCTG CGGAAAAGCG GCGCCTGGAC GAACGGGAGG AACTCCACGG TATCATGGAT CTGGCCGTGG GGTTCTACCG CGAGGCCCTC GAACGGAGCG AGGAGGGGGG GACGGCGCGT CGCTATCTGG AAGGACGTGG TGTGGATCGG GCCACGGCAG AGGCGTACTG CCTCGGCTTT GCCCCGGACC GCTGGGACTT CTTGGCCCGT CATCTCCAGC ATCGCTCGGT GCCGCTGGAA CTGGCGGAGA AGCTAGGTCT TGTGAGACGT CGGGACGGAG GCGGGTTCTA TGACACCTTC CGAAACCGGC TTCTCTTTAC CATCACCGAC ATCCATGGCC GTGCCATCGG GTTCGGCGGC AGGGTTCTCG ACGACTCGCT ACCCAAATAC ATCAATTCTC CCGAATCGCC CATCTATCAC AAGAGCGAGG TCCTCTTCGG CGTCTCCCTC GCCAAGGGAG CCATGCGGGA GACGGCGAGC GCCATCGTGG TGGAGGGGTA TTTTGACCAT TTGGCCCTCT ACCAGGCAGG GGTTAGGAAC GTGGTCGCCA CCTGCGGTAC GGCCCTCACC GAGGGGCATA TCAAGCTTCT GAAGCGCTAC GCGGGGAATG TCTATACCCT GTTCGACGCC GACAGCGCCG GACGGAAAGC GACGCTGCGG GCCATGGACC TCTGCCTCGA TGCCGGATTC CCCGCCCATG TGGTGGAGCT GACCGCCGGG GAGGATCCGG ACAGCTTCAT CCGGAAAGAG GGTGCCGAGA CGTTTTCGGC CCGTCTGGCA AAAGCGCGTC CGGTGGTTGA TTATTTCTTT CGTCAGCTGG TGCGGGACGA GGATACCGGT ACCGTCGAGG GGAAGGTGAA GGTCATCGAC GAGATGGCCC CGCGGCTTGC AAGGGTCTCC AATGCCATCG AGCGGGAACT CTATGTGCGG GAAATCTCCC GGGTTCTCGG TGTCGATGTT CGCTCTTTGG CGCGGAAGAT CGGTGGTTCC TCGTCCCCTG CTGCTCCCCG GGACGAGAGG GCTCCCGCGC AGTCTCGCCG GAAAAAGGGT GCCACCCCCG AGGAGATGCT CCTCTCGCTC ATGGGGCGCT ATCCTGAGGT GGCTGAACGG GTAAGGAACC ACGACCCTGC GCGTATCTTC GGCCCGCAGT TCCTTCCCGT CGCCGAGGCA ATCCTGGAGC GTATCGGAGC CGGGAAGCCA GTCGAATGGA GCGAGATTCT CGATCTGGTG GAAGGGGGAG AGGAACGGGG CCGTATCGCC GCATTTCTTG TCAACGACGA CCATCTGGCC GACGTTGATG TCCACAAGGC CTTTGACCAG TGCCGTGCGG CTCTGGAGCG GAACTCTCTC GGCCGGATGA AGGAGTTGGC TCGGGAACTG GCGGCGACCG ACCCCGATAG TCCTCGCTAC CGGGATCTCC TGGCTGAGAT TGATGCCTTG CGAAACCGTA AATCGCAGTT ATCTTAA
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Protein sequence | MSLIPDDKIR EVRERASILD VVSDYVSLRK SGANYQGLCP FHGEKTPSFN VNPARGIFHC FGCGVGGNAI TFIARMEGLS FPEAVKFLAK RVGVEIEDRP VSAAEKRRLD EREELHGIMD LAVGFYREAL ERSEEGGTAR RYLEGRGVDR ATAEAYCLGF APDRWDFLAR HLQHRSVPLE LAEKLGLVRR RDGGGFYDTF RNRLLFTITD IHGRAIGFGG RVLDDSLPKY INSPESPIYH KSEVLFGVSL AKGAMRETAS AIVVEGYFDH LALYQAGVRN VVATCGTALT EGHIKLLKRY AGNVYTLFDA DSAGRKATLR AMDLCLDAGF PAHVVELTAG EDPDSFIRKE GAETFSARLA KARPVVDYFF RQLVRDEDTG TVEGKVKVID EMAPRLARVS NAIERELYVR EISRVLGVDV RSLARKIGGS SSPAAPRDER APAQSRRKKG ATPEEMLLSL MGRYPEVAER VRNHDPARIF GPQFLPVAEA ILERIGAGKP VEWSEILDLV EGGEERGRIA AFLVNDDHLA DVDVHKAFDQ CRAALERNSL GRMKELAREL AATDPDSPRY RDLLAEIDAL RNRKSQLS
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