| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0375 |
|---|
| Symbol | |
|---|
| ID | 3739741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 418562 |
|---|
| End bp | 420571 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637777648 |
|---|
| Product | NADH/ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_383343 |
|---|
| Protein GI | 78221596 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.044448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAT CAACGGCAGG GCCTGACAAT CCTGTCAGCC TGGTCATAGC CGGCGCGCTC
CTGATCGGCG CGTCGGGCAT TCCGGGCCTT TTTCTCCCCA AGAAGCTGGA CTGGGGGCAG
AAATGCGCCT CTCTCACCGT CGTTCTCGGC TCCATCCTGG GAATCATCGG TGCCCTGGCA
ACGCTCTTTA CTGAACGGAC CGTCTCCTAC ACCCTCGTAA GCTCGCTTCC CTTCGGCCCC
CTTGAGGCCG GCATCGACCC GCTCTCCGCC TTCTTCCTCC TCCCCGTCTT CATCGTCAGC
GCCTGCTGCG CCGTGTACGG CATCGGCTAC TGGCCCGCCA GCCACCACCC CCGCACGGCA
CCGCGGCTCA CCTTTTTCTT CGGCGTCCTC GCCGCTTCCC TGGCATTGGT CCCCCTGGCC
CGGAACGGAG TCCTTTTTCT CATCTTCTGG GAGATCATGG CCCTTTCCGC CTACTTTGCC
CTCGCCACCG ACGATCTGGA GCAGGAGGTT CGAGACGCAT CCCTCATCTA TCTCGTGGCA
ACCCACGCAA GCACCCTCAC CCTCTTCGCC TGCTTCTCCC TGCTAAAAGC GACTGCCGGT
TCCTTTTCAT TTCCTGCGAC AACGGCGCTG GACGGAACAA CTCCCCTTGG GGCCGCCATT
TTCGTGACCG CTCTCCTGGG CTTTGGCCTC AAGGCAGGGG TGATGCCGCT TCACGTCTGG
CTCCCGGGCG CCCATGCCAG CGCACCGAGC CACGTGTCGG CCCTCATGTC GGGAGTCCTC
ATCAAGATGG GAATCTACGG CATGGTCCGC ATCCTCTCCT TCTTCGGAGT GGTCCCGCCC
TGGTGGGGGA TGGTTCTTCT TATGGCGGGA ATTGTGTCGG GAATCCTCGG GGTTGCCTTT
GCCGTGGGAC AGCACGACCT GAAGCGGCTC CTGGCCTACC ACAGCATCGA AAACATCGGC
ATCATCGTCA TGGGGCTCGG CGTTGCCCTC ATCGGCAGGG GAGCGGGACT GCCGCTCCTG
GTGGTCCTCG GGCTCGGGGG GGCGCTTCTC CATATCCTGA ATCACGCCCT TTTCAAGTCC
CTCCTCTTCC TCGGGGCCGG TGCGGTAATT CACGAGGCTG GGACCCGGGA GATCGACAGC
CTCGGCGGGC TGGGCCGACG GATGCCCTGG ACCGCGGCCC TCTTTCTCAC CGGCGCCGTG
GCCATTTGCG GACTCCCCCC CCTGAACGGC TTTGTGAGTG AGCTTCTCGT CTATCTCGGC
TTTTTCTCCG GCCTCGTGCA GGAAAAGGGG GCCGCGGCCC CCCTGCTGGG GCTGGCGGCG
CCGGCCCTGG CCATGGTGGG AGGGATGGCG GTCCTCTGCT TCGTGAAGGT ATTCGGCACG
GTCTTCCTGG GGTTACCCCG GTCGTCCGAC GCGGCCGGGT GCCACGAACC GGGGTGGGCC
ATGCGGGGCC CCATGATGCT CCTTGCCATA CTCTGCGCAG CCATCGGCCT CCTCCCCGTG
GCACTCCCAC GCTTTCTGGA GCCGGCCCTC TTTGCCTGGA GCCCCCAGCT CCCCTTTGCC
GGCGTCCGGC TGGCGGATGC GGCGCCCTTT GGCTGGATTA CCCTCATGGG GCTCATCCTC
CTTCTGGCGA TTCTCGGCAT CGGCGCCTGG CTCTGGAAGC GGGTAACGGA TCAACCTCGG
GGGAGAGTCG GCACCTGGGG CTGCGGCTTT GCCCGTCCCA CTGTCCGGAT GCAGTACACC
GCCTCTTCCT TTGCAGAGAT GTTCGTGAAC CTATTCGCCG CGGTGCTCCG CCCCCGGGTC
CACCCGCCCA AGGTTCAGGG CCTCTTCCCG GGGAAAAGCG CCTTTTCGAG CCATGTTCCC
GAAGCGGTAC TGGAACTGGT CATCACGCCG CTCCTCTCGG CCATGGACCG GAGGTTCTCT
CTGGCCCGCA AGCTCCAGCA CGGCCGGCTC CACCTTTATA TCCTCTACAT CTTCGTGACG
CTGGCGCTCT TGCTGGCGTG GGCCTATTAA
|
|---|
| Protein sequence | MEASTAGPDN PVSLVIAGAL LIGASGIPGL FLPKKLDWGQ KCASLTVVLG SILGIIGALA
TLFTERTVSY TLVSSLPFGP LEAGIDPLSA FFLLPVFIVS ACCAVYGIGY WPASHHPRTA
PRLTFFFGVL AASLALVPLA RNGVLFLIFW EIMALSAYFA LATDDLEQEV RDASLIYLVA
THASTLTLFA CFSLLKATAG SFSFPATTAL DGTTPLGAAI FVTALLGFGL KAGVMPLHVW
LPGAHASAPS HVSALMSGVL IKMGIYGMVR ILSFFGVVPP WWGMVLLMAG IVSGILGVAF
AVGQHDLKRL LAYHSIENIG IIVMGLGVAL IGRGAGLPLL VVLGLGGALL HILNHALFKS
LLFLGAGAVI HEAGTREIDS LGGLGRRMPW TAALFLTGAV AICGLPPLNG FVSELLVYLG
FFSGLVQEKG AAAPLLGLAA PALAMVGGMA VLCFVKVFGT VFLGLPRSSD AAGCHEPGWA
MRGPMMLLAI LCAAIGLLPV ALPRFLEPAL FAWSPQLPFA GVRLADAAPF GWITLMGLIL
LLAILGIGAW LWKRVTDQPR GRVGTWGCGF ARPTVRMQYT ASSFAEMFVN LFAAVLRPRV
HPPKVQGLFP GKSAFSSHVP EAVLELVITP LLSAMDRRFS LARKLQHGRL HLYILYIFVT
LALLLAWAY
|
|---|
| |