Gene Gmet_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0048 
Symbol 
ID3738536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp61422 
End bp61943 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID637777327 
ProductNUDIX hydrolase 
Protein accessionYP_383023 
Protein GI78221276 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.642128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC GCAACCGGAC CACTCCCTTC AAGGGGCTGG TGGTCGACAT TGAGCAGATG 
GACGTACGGA TAGGCGACAA GGGATGGCAC ACGTTCCAGG TTGTACGCCA TCCGGGAGGG
GTGGGCGTCC TGCCGCTCCA CGACGACGGC ACGGTGACCC TCATCCGGCA GTTGCGTCCC
TCGGTGGATG CAACGTTGCT TGAGATCCCG GCCGGCCGCC TCGATCCGGG AGAAGAGCCG
GCGGCATGCG GCCTCCGGGA GCTGGCCGAA GAGACGGGGC TCTCCTCGAC CCGGCTCGAA
TCCCTCGGTG TCATCCTCAC CTCACCGGGA GTCTTTGACG AGGCGATCCA TCTCTACCTG
GCCACCGGAC TCTCCCAGGG GGAGGCCGAC CCGGAGCAGT ACGAGGAGAT TGAAACGGTG
CGGGTCCCCC TTGAGGAGGC TGTCACCATG GCGACGGACG GCCGCATCCG CGACGGCAAG
ACTATCATTG CCCTTTTCCG GGCCAAGGCT GGATTGCCAT GA
 
Protein sequence
MDTRNRTTPF KGLVVDIEQM DVRIGDKGWH TFQVVRHPGG VGVLPLHDDG TVTLIRQLRP 
SVDATLLEIP AGRLDPGEEP AACGLRELAE ETGLSSTRLE SLGVILTSPG VFDEAIHLYL
ATGLSQGEAD PEQYEEIETV RVPLEEAVTM ATDGRIRDGK TIIALFRAKA GLP