Gene Syncc9605_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2675 
SymbolaroE 
ID3736320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2489194 
End bp2490063 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content64% 
IMG OID637777259 
Productshikimate 5-dehydrogenase 
Protein accessionYP_382955 
Protein GI78214176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG GCGGCACCAG CCTTGTGGGC CTGCTTGGCA ATCCAGTGCG CCACTCGCTC 
TCGCCGGTGA TGCAGAACGC AGCCCTCGAA AGCATGGGGC TCAACTGGCG CTACCTGGCC
CTGCCCTGCG ACAGCGAAAG CCTTGATCAG GTGATGAAGG GCCTCAGGGC CGTGGGCTGC
CAGGGGCTCA ACGTCACCAT CCCCCACAAA AAAGACATCG CCGCACTCTG CGAGGAGCGA
AGCCCGTTGG CGCAACGGCT CGGTGCCGTC AACACCCTAA TTCCAGGAGA AGGCGGTGGC
TGGTTCGGCA CCAACACCGA CGTGGAGGGC TTTCTTGCAC CCCTCGGTGC CAACGACACC
TGGGCAGAAC GCCATGCCGT GGTGATCGGC TGCGGCGGAT CAGCGCGGGC GGTGGTCGCC
GGTCTGCAGA CCCTGGACCT CAGCAGCATC ACCGTTGTGG GACGGCGAAG CGAGGCACTA
CAAGCCTTCA TAACTGATCT GCAGCAGGAC AAGGCCCCCC TGACGCCCTG TCTCAACAAC
GCAGTTCAGC TCAACGACGC CATCGCTCGA GCGGCTCTCG TGGTGAACAC CACCCCGGTC
GGGATGGCCC AGCACGGCGA CCCCGAGGCG ATGCCGCTGG GGGCCGACAT CTGGTGCAGG
CTGAGCTCCG AAGCGGTTCT CTATGACCTG ATCTACACAC CCAGGCCCAC CAGCTGGCTT
GCAGCTGGGC AACAACGAGG CCATCGCTGC ATAGATGGCC TCGAGATGCT GGTGCAGCAA
GGCGCTGCCT CGCTGCGGCT CTGGAGTGGA CGCGACGATG TTCCTGTCGA GGCGATGCGA
AGCGCCGCCG CGACTGCTCT TGCGACTTAA
 
Protein sequence
MINGGTSLVG LLGNPVRHSL SPVMQNAALE SMGLNWRYLA LPCDSESLDQ VMKGLRAVGC 
QGLNVTIPHK KDIAALCEER SPLAQRLGAV NTLIPGEGGG WFGTNTDVEG FLAPLGANDT
WAERHAVVIG CGGSARAVVA GLQTLDLSSI TVVGRRSEAL QAFITDLQQD KAPLTPCLNN
AVQLNDAIAR AALVVNTTPV GMAQHGDPEA MPLGADIWCR LSSEAVLYDL IYTPRPTSWL
AAGQQRGHRC IDGLEMLVQQ GAASLRLWSG RDDVPVEAMR SAAATALAT