Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2675 |
Symbol | aroE |
ID | 3736320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2489194 |
End bp | 2490063 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777259 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_382955 |
Protein GI | 78214176 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACG GCGGCACCAG CCTTGTGGGC CTGCTTGGCA ATCCAGTGCG CCACTCGCTC TCGCCGGTGA TGCAGAACGC AGCCCTCGAA AGCATGGGGC TCAACTGGCG CTACCTGGCC CTGCCCTGCG ACAGCGAAAG CCTTGATCAG GTGATGAAGG GCCTCAGGGC CGTGGGCTGC CAGGGGCTCA ACGTCACCAT CCCCCACAAA AAAGACATCG CCGCACTCTG CGAGGAGCGA AGCCCGTTGG CGCAACGGCT CGGTGCCGTC AACACCCTAA TTCCAGGAGA AGGCGGTGGC TGGTTCGGCA CCAACACCGA CGTGGAGGGC TTTCTTGCAC CCCTCGGTGC CAACGACACC TGGGCAGAAC GCCATGCCGT GGTGATCGGC TGCGGCGGAT CAGCGCGGGC GGTGGTCGCC GGTCTGCAGA CCCTGGACCT CAGCAGCATC ACCGTTGTGG GACGGCGAAG CGAGGCACTA CAAGCCTTCA TAACTGATCT GCAGCAGGAC AAGGCCCCCC TGACGCCCTG TCTCAACAAC GCAGTTCAGC TCAACGACGC CATCGCTCGA GCGGCTCTCG TGGTGAACAC CACCCCGGTC GGGATGGCCC AGCACGGCGA CCCCGAGGCG ATGCCGCTGG GGGCCGACAT CTGGTGCAGG CTGAGCTCCG AAGCGGTTCT CTATGACCTG ATCTACACAC CCAGGCCCAC CAGCTGGCTT GCAGCTGGGC AACAACGAGG CCATCGCTGC ATAGATGGCC TCGAGATGCT GGTGCAGCAA GGCGCTGCCT CGCTGCGGCT CTGGAGTGGA CGCGACGATG TTCCTGTCGA GGCGATGCGA AGCGCCGCCG CGACTGCTCT TGCGACTTAA
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Protein sequence | MINGGTSLVG LLGNPVRHSL SPVMQNAALE SMGLNWRYLA LPCDSESLDQ VMKGLRAVGC QGLNVTIPHK KDIAALCEER SPLAQRLGAV NTLIPGEGGG WFGTNTDVEG FLAPLGANDT WAERHAVVIG CGGSARAVVA GLQTLDLSSI TVVGRRSEAL QAFITDLQQD KAPLTPCLNN AVQLNDAIAR AALVVNTTPV GMAQHGDPEA MPLGADIWCR LSSEAVLYDL IYTPRPTSWL AAGQQRGHRC IDGLEMLVQQ GAASLRLWSG RDDVPVEAMR SAAATALAT
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