| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2527 |
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| Symbol | |
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| ID | 3737942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2341328 |
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| End bp | 2344258 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637777112 |
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| Product | Type I secretion system ATPase, HlyB |
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| Protein accession | YP_382810 |
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| Protein GI | 78214031 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.76843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CACCGTCTTT TCCTTTGTTG GAGCATCCGG CGTTCTGTGG CGTCTCCGAC
GCCTCGGTCT CCAGGTTGGA GCGTGAATGC AACGTGTTGC GTTTTGATCT CGGGGGTCAG
TTGTCTGATC CCAATGAGAT CCCTGCTCGG ATCCTGGTCA TCCTCCAAGG CCAGGCCAGG
CTGGTCGGAC GTCACAACGG CCGACTCACC ACGGTGGGCA AGTTCGGCCC GGGCAGTGTG
ATCGGAGCGG CCAGCCTTCT CGCATGTTCC CCCTGCGAGA ACGTGATTGC CGCTGAGGAA
GTGATTGCCT GCGGCATCTC TGATGAGCTG TGGCGTGAGC TCTACGCCAC GGAAGCCTCA
TTCCGTCACT GGTGTGATCA ACAACTCTGG CCCCAGGAGC TGCTCAAGCT GCTGGAAGCT
CTGGAGCAGA ACACCCCGGA AGTCGAGAGT TCTGCCCTCG AAAAGCTCGA GGATGCTTTG
CAAACCGCAG AGCGTTGTTC TCCTGACCCC GCGGCGGTGG ATGCGGCTCT GGCGGCTGGG
AAGCTCCTCT TCGTCACAAG TGCCTGGGGT GAGCTGACGT TCGGTCAGCC CATCCGTTCA
TCCGTGGATC TGCCGGTTTG TGAGCCGTTT TCGCTGCGGT TGGTGGCTCT GCCGGCCTCT
GGGGTTTCCG ATAAAGCCCA AGAAACGATG GACGACAGCT CTGGCTCACG CGTCTCAGCT
TCGTCCATCC AGGACGCAGA GGTGCTGCCC CCCGTCAGCA GCTTCAGTCC TGAGCGCAAT
GTTGTCGATA GCCTGCGTTT GATTCGGGCC GATGGTTCGC TTCAGGAAAC CCTGGCCTGT
TTCCAGATGC TGGCGCAGCT GATGAAGCTG CCGTTCCGCC GTGATGCGAT CGAGAAAGTC
CTGCAGGACA ACCTCCGCCG CGGTCTTGCC CCCAATCTCC AGCTCTGTGG TCAGCTGGCG
GCAAGCCTTG GACTGCATGT GATGGCGTCA CGGGTGCCGG CTCGTGCCGG CACCCGGCTG
CAGGTGCCGT CAATGCTGCC CTGGCATGGG GGATTCGCGC TGGCGATTGC CAGCAATGAG
CGGGGGCTCA AGCTGGCCTC GCCCAACCAG GGCATTGTGA CCTTGGCGCC GGATGATCTG
GCCGAGCAGT TCCCTGAGGG GATCGAACTG CTGTTGATGG AACGATCCAA CAGCAGCCCC
GACCAGACAT TTGGCCCCGG TTGGTTCTGG CCCGCCCTGA AGCGCTACCG CGTCGTGCTG
ATTCAGGTGT TGGCCGCCAG TTTTGTGGTC CAGCTGTTCA CACTGGCCAA CCCGTTGTTG
ATCCAGGTGA TCATTGACAA GGTGATCAGC CAGCGCAGCC TCGACACCTT GCAGGTGCTG
GGCATTGCCC TTGTGGTCGT CACGATCTTG GAAGGGGTGC TCGGCAGCCT CAAGACCTTT
CTGTTTGCTG AAACCACCAA CCGGATCGAT CAGCGCCTCG GGGCTGAGGT GATCGATCAC
CTGTTGCGTC TGCCCCTGGG CTATTTCGAC CGTCGCCCTG TGGGTGAACT CGGGACACGG
GTGGCCGAAC TGGAGAAGAT CCGCAACTTC CTCACCGGTC AGGCCCTCAC CACCATCCTC
GATGCCGCCT TTTCCGTGAT CTACATCGCG GTGATGCTGA TCTACAGCTG GCTTCTCACC
TTGATCGCCC TTTCGGTTCT GCCGATCCAG ATAGGTTTGA CCATGCTGGG GGCCCCCCTC
TTCCGCCGTC AGTTTCGTGC TGCCGCAGAA GAAAACGCCA AGACCCAGAG CCATCTGGTG
GAGGTGCTCA CCGGCATTCA GACGGTGAAG GCCCAGAACG TGGAGATGGT CAGCCGCTGG
CGCTGGCAGG GGTTTTATTC GCAGTACATC GCTCGCACCT TCGAGAAAAC GATCACCGGC
ACAGCCCTGA ATCAGACCAG CCAGGTGCTG CAGAAGATTT CTCAGCTGAT GGTGCTCTGG
ATCGGTGCCT CCATGGTGCT GAATGGCGAT CTAACCCTTG GCCAGCTGAT CGCATTCCGG
ATCATCTCTG GGTACGTCAC CCAGCCCTTG CTCCGTCTGT CCACGATCTG GCAGAACATC
CAGGAACTGC GCGTCAGCTT TGAGCGGCTG GCGGATGTGA TTGATACTCC GGAGGAATCC
GATGAAGTTG ATAAATCGAA GGTGATGCTG CCGCCGCTCC ACGGAGATGT GCGGTTTGAA
AAGCTCTCGT TCCGATTTCG TCCCGGGCAG CCCCAGGTGC TCAAGGAGGT GAATCTTGAG
ATCCCTGCTG GCACCTTTGT GGGCATTGTC GGCCAGAGCG GCAGTGGCAA GAGCACGTTG
ATGAAACTGC TGCCTCGGCT TTATGCGCCA GAGGAAGGCC GGATCTTGAT TGACGACTAC
GACATTGGAA AGGTCGAGCT GTATTCCCTG CGTCGTCAGA TCGGCATCGT CCCCCAGGAC
CCTCTGTTGT TCAGCGGAAG TGTGAGCGAC AACATTGCGC TCACCAACCC GGAAGCCTCC
AGTGAGGAGA TAGTGCGGGC CGCACGTCTC GCCAATGCCC ACGACTTCAT CATGGATCTG
CCCAGTGGCT ACAGCACCCC TGTGGGTGAA CGGGGTGCAG CACTCAGTGG GGGCCAGCGG
CAGCGGGTTG CGATCGCCCG CACCTTGCTC AGCAACCCGA AGCTACTGGT GATGGACGAG
GCCACAAGCG CCCTCGACTA CGAGACCGAA CGGAAGGTTT TCGACAACCT TCTCAGCAGC
CTCAACGACC GCACCGTCTT TTTCATCACC CATCGTCTTT CGACTATTCG CCAGGCCGAC
ATGATCGTGA TGCTTCACCA GGGAGCTGTT GTTGAGATCG GCACCCACGA CGACTTAATC
AGCCAGCGCG GTCGCTACTA CGCCCTTTAC CGCCAGCAAG AGAGTTCCTG A
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| Protein sequence | MTQTPSFPLL EHPAFCGVSD ASVSRLEREC NVLRFDLGGQ LSDPNEIPAR ILVILQGQAR
LVGRHNGRLT TVGKFGPGSV IGAASLLACS PCENVIAAEE VIACGISDEL WRELYATEAS
FRHWCDQQLW PQELLKLLEA LEQNTPEVES SALEKLEDAL QTAERCSPDP AAVDAALAAG
KLLFVTSAWG ELTFGQPIRS SVDLPVCEPF SLRLVALPAS GVSDKAQETM DDSSGSRVSA
SSIQDAEVLP PVSSFSPERN VVDSLRLIRA DGSLQETLAC FQMLAQLMKL PFRRDAIEKV
LQDNLRRGLA PNLQLCGQLA ASLGLHVMAS RVPARAGTRL QVPSMLPWHG GFALAIASNE
RGLKLASPNQ GIVTLAPDDL AEQFPEGIEL LLMERSNSSP DQTFGPGWFW PALKRYRVVL
IQVLAASFVV QLFTLANPLL IQVIIDKVIS QRSLDTLQVL GIALVVVTIL EGVLGSLKTF
LFAETTNRID QRLGAEVIDH LLRLPLGYFD RRPVGELGTR VAELEKIRNF LTGQALTTIL
DAAFSVIYIA VMLIYSWLLT LIALSVLPIQ IGLTMLGAPL FRRQFRAAAE ENAKTQSHLV
EVLTGIQTVK AQNVEMVSRW RWQGFYSQYI ARTFEKTITG TALNQTSQVL QKISQLMVLW
IGASMVLNGD LTLGQLIAFR IISGYVTQPL LRLSTIWQNI QELRVSFERL ADVIDTPEES
DEVDKSKVML PPLHGDVRFE KLSFRFRPGQ PQVLKEVNLE IPAGTFVGIV GQSGSGKSTL
MKLLPRLYAP EEGRILIDDY DIGKVELYSL RRQIGIVPQD PLLFSGSVSD NIALTNPEAS
SEEIVRAARL ANAHDFIMDL PSGYSTPVGE RGAALSGGQR QRVAIARTLL SNPKLLVMDE
ATSALDYETE RKVFDNLLSS LNDRTVFFIT HRLSTIRQAD MIVMLHQGAV VEIGTHDDLI
SQRGRYYALY RQQESS
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