Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0318 |
Symbol | |
ID | 3737552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 323038 |
End bp | 323673 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637774902 |
Product | peptidase S16, lon-like |
Protein accession | YP_380649 |
Protein GI | 78211870 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0927048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCGATT TTTCTGTGAG GGAGCTTCCC CTGTTCCCCC TGCCGGACGT CGTGTTGTTC CCGCAGCAGC TCCTGCCGCT GCACATTTTT GAATCGCGTT ATCGGATGCT TCTCCAGACG GTTCTGGAGA CCGACAAGCG ATTCGGCATC GTTCGCATCA ACCCTGAGAA CGGCGAAATG GCCGAAATCG GTTGCTGCGC TGAGGTGCTT CAGCATCAAA CAACAGAAGA CGGGCGCAGC TACATCGTTT CGTTGGGCCA ACAGCGGTTC CGGCTGCTCA ACATCACACG GGAAACGCCC TACCGAACAG GGATGGTGAG CTGGCTGGAG GATGAGCCCG TGGCCGACAC TGACCAGCTC AACAGCCTGC GGGACAAGGT GAGCGAAGCC TTGAATGACG TCGTTCAACT GACCAGCAAG CTGCAGAACC GAGAGGTGGA ACTGCCCGAA GATCTGCCTG ATCTGCCGCG GGAACTGTCC TTCTGGATCA GCGCCCATCT GGATCAGGCC GCTTCAGAGC AACAGAGTCT TCTGGAACTA ACCGACACCC ACGAGCGGTT GAGCCAGCAA TTTGAAATGT TGGATCACAC CCGACGCCAA CTGGCGGCCC GCACTGTGTT GATGGATCTG AAGTGA
|
Protein sequence | MSDFSVRELP LFPLPDVVLF PQQLLPLHIF ESRYRMLLQT VLETDKRFGI VRINPENGEM AEIGCCAEVL QHQTTEDGRS YIVSLGQQRF RLLNITRETP YRTGMVSWLE DEPVADTDQL NSLRDKVSEA LNDVVQLTSK LQNREVELPE DLPDLPRELS FWISAHLDQA ASEQQSLLEL TDTHERLSQQ FEMLDHTRRQ LAARTVLMDL K
|
| |