| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0987 |
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| Symbol | |
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| ID | 3746912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1332330 |
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| End bp | 1333589 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773517 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_379293 |
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| Protein GI | 78188955 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA AAAAAAACTC CATAAATCGT AAAACTCTCT GGCTGCTGCT GGCTGCTTTG
GTGATTGGCA GCGGCTCCCT CATTTTTTGG CTACGCTCTC GCGAAAAGCC TATTGAGATA
ACTACTGAAA AAGCTTTTGA AAAAGAGGTG GTGCATCTTA TTACCGCTAC AGGCACTATT
CAACCTGAGC TTGTGGTGGC TATGTCGCCC GATGTTTCGG GTGAAATTAT TGAGCTGCCA
ATTAAGGATG GAGAAGAGGT AAAGCAAGGT GCGTTGCTCT TTAAAATTCA ACCCGATATT
TACGTCAATC AAGTGCAGCA AAGCCAAGCG CAACTGAATG CCGCCCTATC GCAAAGCGCT
GAAGCAAATG CTCGCAAGCT CAAAGCTGAG GATGATTTCC GAAAAGCTAA CCTCCTTTAT
AAAGAGAAGC TTATCTCCCA AACCGATTAT CTTGCCTCTA AAACCAATGC CGAAGCTGCA
ACAGCGGCAT ACAAAGCCTC ACTCTTTGCC GTTGATCAGC AAAAAAGTTT GTTGGTGCAA
AATCGCGACC GCATGAACAA AACCACCGTG CGTGCCCCTA TTAATGGCAC CATTATTGCC
CTCAATAGTA AAGCGGGTGA GCGCGTGGTT GGCACGGGGC AATTCCCCGG TACCGAAGTG
CTGCGTCTTG CAAACCTTGA TAGTATGCAG GTTGAAGTAG AGGTGAATGA GAACGATATT
GTAAAAGTTA CACAAGGCAA TCCTGTAACC ATTACAGTGG ACGCTTTTGG CGACCGCAAG
TTTAGCGGTG TAGTGCGCGA AATTTCCAAC TCCGCCATTG CCAAAGCGGC TGGTACGCAA
GAGGAGGTAA CCAACTTTGC GGTTAAAATT CGCATTCTTA ACCACAACCG ATTGCTCAAA
CCCGGCATGA GTGCTACGGC TGATATTGAG GCTGAACGCA TTAGCAAGGC ATTAGTGGTG
CCCATTCAAA GCGTTACCAT TCGAGGCGCA AGCAAACCGC AACATGACGA AGGTGAGCAA
AAAGGGGTAA GCGTTGCACC TTCGGGCAAA GCAAGCGAAG GGCAGCAAGG AGTTTTTGTG
GTCTCAAAAA ATAAGGCGTG GTTTCGCCCA GTAACAACGG GCACTACCGA CAACACGCAC
ATTATTGTTA CAAGCGGTAT TCGTAAAGGT GAAGAGGTGG TTTCGGGAAG TTACAGCGCC
ATTACCAATC AACTGAAAAA TGGCAGCCTT ATTAAACGCT TAACGCCCGA AACTCCATGA
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| Protein sequence | MSKKKNSINR KTLWLLLAAL VIGSGSLIFW LRSREKPIEI TTEKAFEKEV VHLITATGTI
QPELVVAMSP DVSGEIIELP IKDGEEVKQG ALLFKIQPDI YVNQVQQSQA QLNAALSQSA
EANARKLKAE DDFRKANLLY KEKLISQTDY LASKTNAEAA TAAYKASLFA VDQQKSLLVQ
NRDRMNKTTV RAPINGTIIA LNSKAGERVV GTGQFPGTEV LRLANLDSMQ VEVEVNENDI
VKVTQGNPVT ITVDAFGDRK FSGVVREISN SAIAKAAGTQ EEVTNFAVKI RILNHNRLLK
PGMSATADIE AERISKALVV PIQSVTIRGA SKPQHDEGEQ KGVSVAPSGK ASEGQQGVFV
VSKNKAWFRP VTTGTTDNTH IIVTSGIRKG EEVVSGSYSA ITNQLKNGSL IKRLTPETP
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