Gene Cag_0029 details

Gene Information

• Locus tag: Cag_0029
• ID: 3746998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 31358
• End bp: 33271
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637772553
• Product: DNA gyrase, B subunit
• Protein accession: YP_378351
• Protein GI: 78188013
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCACCAG CGGCATATGG CGCTACCAAC ATTCAAGTGC TTGATGGTAT TGAGCATGTG 
CGTATGCGTC CGGCAATGTA CATTGGCGAT ATTCATAGCC GTGGTTTGCA CCATTTGGTG 
TATGAAATTG TTGATAACTC CATTGACGAA ACGCTTGGTG GCTTTAACGA CTACATTTTT 
GTAGCACTCA ACGCCGATGG CTCCATTACC GTTATTGACC ACGGTCGAGG CATTCCGGTG 
GATATGCACC CTGAAAAGCA GAAGTCAGCG CTTGAGTTAG TTATGACGGT TATTGGCGCT 
GGTGGTAAGT TCGATAAAGG TGCTTACAAG GTGTCGGGAG GTTTACACGG CGTTGGTGCA 
TCGGTAGTAA ATGCGCTTTC GGAATGGTGC GAAGTTGAGG TCTATCGCGA TGGCAAGGCG 
TACTACCAGC GTTACGAACG TGGCGTGCCA CAAGGCGATG TTAAGGTAAT TGGCGACTCC 
GATCAGCGAG GTACCAAAAC CACCTTTATG CCTGATGGCA CCATTTTTAA AACCACCGAG 
TTCCGTAAAG AGATTATTAT TGATAGAATG CGAGAGTTGG CATTCCTCAA TAAAAACCTA 
CGCATTATTG TTCAAGATAC GAATGGCGAA CAAGAGGAAT TCCATTTTGA AGGTGGCATT 
TGTGAATTTG TACGCTTTAC CGATCAAAAC CGCCTGAACC TTCTGCGAGA ACCCATTTAT 
CTCTACGGTG AGCGCGATGG TACCGTGGTT GAAATTGCAC TGCAATACAA CGACTCCTAT 
CAAGAAAACG TCTTTAGCTA CGTTAACAAC ATTAACACGC ATGAAGGCGG CACGCACGTT 
ACAGGTTTCC GTAAAGCTTT AACGCGCACC CTCAATTCCT ACGCGCAAAA AAATGATTTG 
CTGAAAAACT TGAAGTTAAC CCTTACGGGC GATGACTTTA AGGAGGGGCT AACAGCGGTG 
ATTTCGGTAA AGGTTGCCGA ACCGCAGTTT GAGGGGCAAA CCAAAACCAA GCTTGGCAAC 
TCCGAAACGC AAAGCATTGT AGAAACCGTT GTTAATGATC AACTTGCAGA GTTTGCCGAA 
AGCAACCCCA ACACGCTCAA GCTGATTATT GAGAAGGTGA AAGGTGCTGC CATGTCGCGC 
GAAGCTGCCC GCAAAGCAAA GGAACTTACA CGCCGCAAAT CGGTGCTCGA AAGTTCAGGC 
TTGCCCGGCA AGCTTGCTGA TTGCTCCATT AACGACCCTG AGCATTGCGA ACTTTACATT 
GTGGAGGGCG ATTCGGCAGG TGGTAGTGCC AAGCAAGGAA GAGATCGCAG CTTTCAAGCC 
ATTTTACCGC TTAAGGGTAA AATTCTCAAC GTTGAAAAAG CACGGCTGCA TAAAATGCTG 
GAAAACGAGG AAATTAAAAC AATCATTCTT GCGCTTGGCA CCAGCTTTGG CGATGAAGAG 
TTTGCGGTAG AAAAATTACG CTACGGCAAA ATTATTATTA TGACTGATGC CGACGTTGAT 
GGTGCCCACA TTCGCACGTT GTTGCTAACC TTTTTCTTTC GCCACATGCG TCCCGTGATT 
GAGGCTGGAA GAGTTTATAT TGCCCAGCCA CCACTTTATT TGGTGAAATC GGGTAAAGAT 
CAGCACTATG CGTGGGATGA TGATGAGCGC AACAGCATTG TGGATAACAT GAAGAAAATG 
CAGAAGAGTA AAGCCAACAT CCACATTCAG CGCTACAAAG GTCTTGGAGA AATGAACCCC 
GAACAGCTTT GGAGCACCAC CATGGATCCT GCCCACCGCT CACTTTTACT TGTAAGTGTA 
GAAAATGCTA TGGAAGCCGA TCAGGTGTTT TCAACGCTTA TGGGCGATAA GGTTGAACCA 
CGCCGCGAAT TTATTGAGAA AAATGCACGC TACGTTCGCC GCTTAGATGT TTAA 

 

Protein sequence

MPPAAYGATN IQVLDGIEHV RMRPAMYIGD IHSRGLHHLV YEIVDNSIDE TLGGFNDYIF 
VALNADGSIT VIDHGRGIPV DMHPEKQKSA LELVMTVIGA GGKFDKGAYK VSGGLHGVGA 
SVVNALSEWC EVEVYRDGKA YYQRYERGVP QGDVKVIGDS DQRGTKTTFM PDGTIFKTTE 
FRKEIIIDRM RELAFLNKNL RIIVQDTNGE QEEFHFEGGI CEFVRFTDQN RLNLLREPIY 
LYGERDGTVV EIALQYNDSY QENVFSYVNN INTHEGGTHV TGFRKALTRT LNSYAQKNDL 
LKNLKLTLTG DDFKEGLTAV ISVKVAEPQF EGQTKTKLGN SETQSIVETV VNDQLAEFAE 
SNPNTLKLII EKVKGAAMSR EAARKAKELT RRKSVLESSG LPGKLADCSI NDPEHCELYI 
VEGDSAGGSA KQGRDRSFQA ILPLKGKILN VEKARLHKML ENEEIKTIIL ALGTSFGDEE 
FAVEKLRYGK IIIMTDADVD GAHIRTLLLT FFFRHMRPVI EAGRVYIAQP PLYLVKSGKD 
QHYAWDDDER NSIVDNMKKM QKSKANIHIQ RYKGLGEMNP EQLWSTTMDP AHRSLLLVSV 
ENAMEADQVF STLMGDKVEP RREFIEKNAR YVRRLDV