Gene Cag_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0017 
SymbolpyrE 
ID3747887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp17432 
End bp18019 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID637772541 
Productorotate phosphoribosyltransferase 
Protein accessionYP_378339 
Protein GI78188001 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase
[TIGR01367] orotate phosphoribosyltransferase, Thermus family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.722393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAT CCTCTGCTAT GCTTGATGTT TTTAAAGCTA CTGGTGCACT GCTTGAAGGG 
CACTTTAAGC TTACCTCTGG TCGCCACAGC AACACCTATT TTCAATGCGC TAAAGTGTTG
CAACACCCTC AGCACCTTTC GGCTATTTGT GGTGCAATTG CTGAACGCTT TGCACAAAGT
GGCGTGCAAA CGGTTATTTC GCCTGCTATT GGTGGCATTG TGGTTGGTAC CGAAGTTGGG
CGTCAACTTG GGGTGAAAAC CATTTTTGCG GAACGTAAAG ATGGTGCTAT GACCATTCGT
CGTGGTTTTA GTGTGGAGAA GGGTGAACGC TTTTTGGTGA TCGAGGATGT TATTACGACA
GGCGGTTCGG TGGCTGAAGT AATGGCGCTT ATTACAGCGG CTGGTGGCGA AGTGGTAGGC
GTTGGTTCGG TGGTTGATAG AAGCAATGGC AAGGTCAAAC TTGCAGAGAA TCAGTTTTCG
GTGCTTTCAA TGGAGGTGAT TAGCTATACG CCAGAAGAGT GCCCGCTTTG TAAGCAAGGG
TTGCCGATTG ATGCACCCGG TAGCCGTGCT AACCAGCAAC CAGTGTAA
 
Protein sequence
MSTSSAMLDV FKATGALLEG HFKLTSGRHS NTYFQCAKVL QHPQHLSAIC GAIAERFAQS 
GVQTVISPAI GGIVVGTEVG RQLGVKTIFA ERKDGAMTIR RGFSVEKGER FLVIEDVITT
GGSVAEVMAL ITAAGGEVVG VGSVVDRSNG KVKLAENQFS VLSMEVISYT PEECPLCKQG
LPIDAPGSRA NQQPV