| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2141 |
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| Symbol | |
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| ID | 3741928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 2043433 |
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| End bp | 2044452 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637772339 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_378142 |
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| Protein GI | 78185708 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGTCGT CGGAACAAGG CCAAGGACGA CCTCCCCTGC CAGAGGAAGT GTTTACGCAC
ACGTTCGGGG AAGGCGAGGG GGAGTTGGTG ACGCTCACCT ACCCGAAGCC GCTTCCCATG
CGATTGGATC GCTGGTTGGT GAGCCAACGC ACGGAGCAGA GCCGTGCTCG GATTCAAAAA
TTCATTGATG CCGGCTATGT ACGCGTCAAT GGCAAACAGG GCAAGGCCAA AACACCACTC
CGCGAGGGCG ATCAGGTGCA GTTGTGGATG CCGCCACCGG AGCCACTGCC GTACTTAAAG
CCCCAGCCAA TGGATCTTGA TGTGCTCTTT GAGGATGAGC ACATCATCGT TCTGAATAAA
TCCGCTGGGC TAACAGTGCA TCCAGCTCCG GGGAATAAAG ACGGCACATT GGTGAATGGA
TTGCTTCACC ATTGCCCAGA TCTTCCTGGC ATTAGTGGGA AATTGCGGCC GGGAATTGTG
CACCGGTTGG ATAAAGATAC AAGCGGCTGC ATTGTTGTTG CAAAATCTCA AGAAGCCCTC
GTAAAGTTAC AAGTCCAGAT TCAAAAGCGG GTGGCTTCAA GGGAATATTT TGCTGTGGTT
CACGGGGTTC CGGATGGAGA TAGTGGAACA ATTATTGGTG CGGTGGGTCG TCATCCTGTA
GACCGTAAAA AATATGCCGT GGTGAGTGAT GAATCTGGGC GTTATGCCCG AACGCACTGG
ACCTTGATCG AACGTTTTGG CGATTATTCT TTACTGCGCT TCAAGCTTGA TACGGGTCGA
ACGCATCAGA TACGGGTGCA TTGTGCCCAC ATCAATCATC CCGTGGTGGG AGATCCCACC
TATAGCCGTT GCCGCAAGCT TCCCCTGGAT CTTCCCGGCC AGGCCCTGCA CGCCGTGCAG
TTGGGATTGG ATCATCCGAT CACGGGAGAG CGCATGGTGT TTGAGGCGCC ATTGCCCCCA
GTGATGGAGA AGCTGTTGTT GGTGTTACGG CGACGCTCCG GGGCATCACC CGCGAGTTAG
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| Protein sequence | MTSSEQGQGR PPLPEEVFTH TFGEGEGELV TLTYPKPLPM RLDRWLVSQR TEQSRARIQK
FIDAGYVRVN GKQGKAKTPL REGDQVQLWM PPPEPLPYLK PQPMDLDVLF EDEHIIVLNK
SAGLTVHPAP GNKDGTLVNG LLHHCPDLPG ISGKLRPGIV HRLDKDTSGC IVVAKSQEAL
VKLQVQIQKR VASREYFAVV HGVPDGDSGT IIGAVGRHPV DRKKYAVVSD ESGRYARTHW
TLIERFGDYS LLRFKLDTGR THQIRVHCAH INHPVVGDPT YSRCRKLPLD LPGQALHAVQ
LGLDHPITGE RMVFEAPLPP VMEKLLLVLR RRSGASPAS
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