Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2026 |
Symbol | |
ID | 3742066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1932406 |
End bp | 1933254 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637772223 |
Product | prephenate dehydratase |
Protein accession | YP_378027 |
Protein GI | 78185593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.713159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAC GTCTCGCTTA CCTCGGCCCA ACAGGGACCT ATGGAGAGCA AGCCGCCCGC GCTTTGGTGC AACTCGAAGC GATGGGTGAT GTTCAATTCG TTCCCTGTAT TGGCTTGCGC GCCGTTGTTG AGCAGTTGGC AAGCGGGATG TGCGACGCGG CTGTGGTGCC GATTGAGAAT TCTGTGGAGG GTGGTGTAAC GGCCACCTTG GATGCGTTGT GGTCTCATCG CGACCTGTGT ATTCGTCGCG CTCTGGTGTT GCCCATCCGT CATGCACTCT TGGGCCAAGG GGATTTGTCC GGGATTAATG AGGTGTTGTC TCATCCACAG GCTTTGGCCC AGTGCAGTGG TTGGTTGGCC AAGCATGTGC CGCAAGCATT GCAGCTCCCC ACGTCCTCAA CTGCGGAAGC TGCACGATTG GTGGTGGGGA GTCATTTCCG AGCCGCCATT GCTTCCAGGG TGGCCGGAAT CGAACACGGC TTGGAGGAGT TGGCGTATCC GGTGAATGAT GTGGCCGGAA ATTGCACCCG CTTCCTCTTG CTGAAGCGTG GTGAACGTCG TGAACAAGGC TCGGTGGCCA GTGTGGCCTT CTCACTCCAT CGAAATGCCC CAGGGGCCTT ATTGGAGGCT CTCGCTTGTC TTGCGGATCG AGGACTGAAC ATGAGCCGCA TTGAGTCGCG ACCGTCGAAG CGTGAATTTG GTGAATACGT CTTTTTTGTC GATGTTGATC TTCCGAGCAA TCGAGCAGAG GCTCTGCCTG AGTTGATCGC ACAACTCGAG CCTTTTTGTG AGCACCTCTC CCATTTCGGT GCTTATCCGA GCACTGAACT CAGTGACGTT TCAACTTGA
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Protein sequence | MPTRLAYLGP TGTYGEQAAR ALVQLEAMGD VQFVPCIGLR AVVEQLASGM CDAAVVPIEN SVEGGVTATL DALWSHRDLC IRRALVLPIR HALLGQGDLS GINEVLSHPQ ALAQCSGWLA KHVPQALQLP TSSTAEAARL VVGSHFRAAI ASRVAGIEHG LEELAYPVND VAGNCTRFLL LKRGERREQG SVASVAFSLH RNAPGALLEA LACLADRGLN MSRIESRPSK REFGEYVFFV DVDLPSNRAE ALPELIAQLE PFCEHLSHFG AYPSTELSDV ST
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