Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3400 |
Symbol | |
ID | 3748568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 258485 |
End bp | 259651 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637761665 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_367646 |
Protein GI | 78064877 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.089365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.767556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCC CGCTCAACTA CATCGCGCGC AACCTGTGGA CCCGGCGGCT CACCACCGCG CTGACCGCCG GCGGGATGGC GCTCGTGATC TTCGTGTTCG CGACCGTGCA GATGCTCGAC GCGGGGCTCA CGAAGACGCT CGTGTCGACC GGCGAGCCCG ACAACGCGGT GGTGATCCGC AAGGGCGCCG AAACCGAGAT CCAGAGCTCG ATCGACCACC AGCAGGCCAA TGCGCTCGAG ATGCACCCGG CCGTCGCGCT CGGCCCCGAC GGCCGGCCGC TCGTGTCGAA GGAAGCGGTC GTGCTGATCT CGCTGGTGAA GACCTCGTCC GGCAAGCCGT CGAACGTCGT GATCCGCGGC GTGTCGCCGG CCGGCCTCGC GCTGCGCCCG CACGTGAAGC TCGTCGGGGG CCGCATGTTC ACGCCCGGCT CGTCGGAAAT CATCGTCGGC AGCGCGATCG CGAAAGGGTT CAGCGGCACG CAGCTCGGCG ACAGCCTGCA TTTCGCGCAG CGCGACTGGA CCATCGTCGG CATCTTCGAC GCGGGCGGCA GCGGCTTCGA TTCGGAGATC TGGGGCGACG TCGACCAGCT GATGCAGTCG TTCCGGCGCA CCAGCTATTC GTCGATGGTG CTGCGCATCC CGAGCGCCGA CGGCTTCGCA CGCTTCAAGG CCGACATCGA CGTCGACCCG CGGCTCACCG ACGAGGCGAA ACGCGAGCAG ACCTTCTACG GCGACCAGTC GAAGGCGCTG TCGACGTTCA TCAACATCCT CGGCATCACG CTGTCGACGA TCTTCTCGAT CGCCGCGATG ATCGGCGCGA TGATCACGAT GTATGCGTCG GTCGCGAACC GCGTCGCCGA GATCGGCACG CTGCGCGCGC TCGGCTTCAA GCGCCTGAAC GTGCTCGCCG CGTTCCTGCT GGAAGCGCTG CTGCTCGGCT TCGTCGGCGG CGTCGCGGGG CTCGCGTGTG CGTCGCTGAT GCAGTTCGCG TCGTTCTCGA CGACCAACTT CCAGACCTTC GCGGACCTGT CGTTCCGCTT CGTGCTGACG CCCGCGATCG TCGTGAAGAC GCTGCTGTTC TCGCTCGTGA TGGGGCTGGT CGGCGGGTTC CTGCCGGCGA TGCGCGCCGC GCGGCTGAAG ATCGTCGACG CGCTGCGCGC ACAGTGA
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Protein sequence | MAIPLNYIAR NLWTRRLTTA LTAGGMALVI FVFATVQMLD AGLTKTLVST GEPDNAVVIR KGAETEIQSS IDHQQANALE MHPAVALGPD GRPLVSKEAV VLISLVKTSS GKPSNVVIRG VSPAGLALRP HVKLVGGRMF TPGSSEIIVG SAIAKGFSGT QLGDSLHFAQ RDWTIVGIFD AGGSGFDSEI WGDVDQLMQS FRRTSYSSMV LRIPSADGFA RFKADIDVDP RLTDEAKREQ TFYGDQSKAL STFINILGIT LSTIFSIAAM IGAMITMYAS VANRVAEIGT LRALGFKRLN VLAAFLLEAL LLGFVGGVAG LACASLMQFA SFSTTNFQTF ADLSFRFVLT PAIVVKTLLF SLVMGLVGGF LPAMRAARLK IVDALRAQ
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