Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3318 |
Symbol | |
ID | 3748484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 163338 |
End bp | 165041 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637761581 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_367564 |
Protein GI | 78064795 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT CCAAGGATCT CGAGCAGCCC GCCACCACCG GCGCGCGACT GCTCGTCGAT GCGTTGCTCG CCAATCACGT CGAACGCGTG TTCTGCGTGC CGGGCGAGAG TTTCCTCGCC GTACTCGATG CGCTCGCGGA CGACACCGCC CGCATCCAGA CGGTCGTCTG CCGCCACGAG GCGGCCGCCG CGAACATGGC CGAGGCCGTC GGCAAGCTGA CCGGCCGCCC CGGCATCGCA TTCGTCACGC GCGGGCCCGG CGCGACCCAT GCGTCGATCG GCGTGCACAC CGCGTTCCAG GATTCGACGC CGATGATCCT GTTCGTCGGC CAGTGCGCGC GCGAGCACCT CGACCGCGAA GCCTTCCAGG AAATCGACTA CCGGCGGATG TTCGGCCAGA TGGCGAAATG GGTCGCGCAG ATCGACGACC CGCGCCGCAT TCCCGAATAC CTGAGCCATG CGTTCCACGT CGCGACGTCC GGCAGGCCCG GCCCGGTCGT GCTCGCGCTG CCGGAAGACG TGCTGTCCGA AGCATGCGCG CCGCAGCCCG TCGTGCCGGC CGCGAAGCGC GTCGCGGCCG CGCCGTCGGC CGCGCAGCTC GACGAGTTGC GCGAGCGGCT CGCGCGCGCG GAACGGCCGT TCGCGATCGT CGGCGGCAGC GGCTGGACGC CCGACGCGTG CGCGAACCTG CGCACCTTCG TCGAGCGCTG GCAGTTGCCG GTGGCCTGCG CATTCCGCTA CCAGGACACG ATCGACAACG CGCACCCGAA CTACGCGGGC GACGTCGGGC TCGGGATCAA CCCCGCGCTC GGGAAGCGCA TCCGCGACGC CGACCTGCTG CTCGTGATCG GGCCGCGCCT CGGCGAAGCG ACGACCGGCG GCTACACGCT GCTCGACATC CCGAAGACGC GCCAGACGCT GATCCACGTG CACCAGGGCG CGGACGAGCT CGGCCGTGTG TATGCGGCCG ACCTGCCGAT CGTGTCGGGC ATGCCCGAGA TCGCCGCGCC GCTCGCCGCG CTCGAGGCGC CCGAGCACCC GGCGTGGGCC GGCACGGCTG CCGACGCGCA TCGTGCGTAT CGCGAATGGC ATGCGCCGCT GCCGATGCCC GGCGACGTCC AGCTCGGCGA CGTGATGGTG CAGCTGCGCG AGCGCCTGCC GCATGACGCG ATCCTCACCA ACGGCGCCGG CAACTATGCG ATCTGGCTGC ATCGCCACTT CGCGTACCGG CACTTCCGCT CGCAGCTCGC GCCGACCAGC GGCGCGATGG GCTACGGCGT GCCAGCCGCG CTTGCCGCGA AGTCGCTGTA CCCGTCGCGC GCCGTCGTCG CGCTCGCGGG CGATGGCTGC TTCATGATGG CCGGCAACGA GCTCGCGACC GCGATGCAGT ACGGGCTGAA CATCGTCGTG ATCGTCGTCA ACAACGGGCA TTTCGGCACG ATCCGCATGC ATCAGGAGCG CAACTACCCG GGACGCGTGC ACGGCACGGG GCTCACGAAT CCCGATTTCG CCGCGTATGC GCGCGCGTTC GGCGCGCATG GCGAGACCGT CGAGCGCACC GCCGATTTCG CGCCCGCGCT CGAACGCGCG CTGACCTGCG GGCTGCCCGC GCTGATCGAG ATCCGTATTC CGCAGGACGC CAGCACGCCG GCCGCGACGC TCGAGCAGAT CCGCGAACAG GGCCGCCGCG CACGCGGCGG ATGA
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Protein sequence | MSHSKDLEQP ATTGARLLVD ALLANHVERV FCVPGESFLA VLDALADDTA RIQTVVCRHE AAAANMAEAV GKLTGRPGIA FVTRGPGATH ASIGVHTAFQ DSTPMILFVG QCAREHLDRE AFQEIDYRRM FGQMAKWVAQ IDDPRRIPEY LSHAFHVATS GRPGPVVLAL PEDVLSEACA PQPVVPAAKR VAAAPSAAQL DELRERLARA ERPFAIVGGS GWTPDACANL RTFVERWQLP VACAFRYQDT IDNAHPNYAG DVGLGINPAL GKRIRDADLL LVIGPRLGEA TTGGYTLLDI PKTRQTLIHV HQGADELGRV YAADLPIVSG MPEIAAPLAA LEAPEHPAWA GTAADAHRAY REWHAPLPMP GDVQLGDVMV QLRERLPHDA ILTNGAGNYA IWLHRHFAYR HFRSQLAPTS GAMGYGVPAA LAAKSLYPSR AVVALAGDGC FMMAGNELAT AMQYGLNIVV IVVNNGHFGT IRMHQERNYP GRVHGTGLTN PDFAAYARAF GAHGETVERT ADFAPALERA LTCGLPALIE IRIPQDASTP AATLEQIREQ GRRARGG
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