Gene Pcar_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3053 
Symbol 
ID3725760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3565955 
End bp3566632 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID637752664 
Producthypothetical protein 
Protein accessionYP_358458 
Protein GI77920643 
COG category[R] General function prediction only 
COG ID[COG4887] Uncharacterized metal-binding protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones89 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA AAGATCCCCG TTGCGCCAGC TGCCCCTATG AAGCCTCCGA CCGGATCTGC 
CGGGATAAAA ACGGCAAGGC TCCGGTATTC TGCCCGACTT TGAATATGCC CGATCTGGCG
CAGGAGAGCC TGAAGCAATA CAACGATGAC CCGGCTGTCA GCAACTTCGC CAAACAAGCC
TCCATCCAGG AAGCGGACGG ATACATCAAT CGCGAGCTTG GTCATGCAGC TGTTCGGGGT
TCAAAAACCC GCATGGAAGA GATCATGGAG TTTGCCGCCA AGATGGGCTA CAAGCGCCTC
GGTCTGGCCT TTTGCATGGG GTTGAGAAAA GAGGCCCAGG TGGTGGAGAA ACTCTTATCC
TCCCGAGGTT TCGAGGTGGT TTCGGCCATC TGCAAGGTCG GCGGGATCTC CAAAGAGTGC
ATCGGTCTGA GCAAAGAACA GCAGGTCGAT CCCAAGGGAA CCGAGGTCAT GTGCAATCCC
ATTATGCAGG CCATGATTTT GAACGAGGGC AAAACCGATT TCAACGTGTT GCTGGGTCTG
TGTGTGGGGC ATGATTCCCT GTTCCTGAAG TATGCCGAAG CCCCCTGCAC CGTGCTGGCC
GTCAAAGACC GGGTGCTCGG CCACAATCCC CTTGCGGCCA TCTACAATGT GGATAGCTAT
TACCGATCTC TGAAGTAA
 
Protein sequence
MTDKDPRCAS CPYEASDRIC RDKNGKAPVF CPTLNMPDLA QESLKQYNDD PAVSNFAKQA 
SIQEADGYIN RELGHAAVRG SKTRMEEIME FAAKMGYKRL GLAFCMGLRK EAQVVEKLLS
SRGFEVVSAI CKVGGISKEC IGLSKEQQVD PKGTEVMCNP IMQAMILNEG KTDFNVLLGL
CVGHDSLFLK YAEAPCTVLA VKDRVLGHNP LAAIYNVDSY YRSLK