Gene Pcar_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2576 
Symbol 
ID3725279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3025298 
End bp3025768 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID637752187 
Producthypothetical protein 
Protein accessionYP_357984 
Protein GI77920169 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.09351e-15 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT GCCTGCTTTG CGTGGGGCGC CTCTCCATCG GTTACCTGCG CGAAGGCGCG 
GCCGATTTCG AAGCGCGTCT GCAGCGCTAC CTTCCCGTGC GCATTGTGGA GCTGAAGGAA
GAAAAGAGCG GCAAAAACGA TGCGGAATAT ATTCGCCGCC AGGAAGGGCG CAGGATTCTT
GAAAAAATTC CGGCGGGATC TTTTGTGATC GCGTTGGATG AGCGTGGTCG TTCCGTATCA
TCGGAAAAGC TGGCCGCTTT ACTCGAACGG CATATGATGG AGTCGACTCC CGAGTTGACC
CTGATTATCG GTGGAGCCTA CGGCCTTTGT GATGAGGTCA AACAGCGCGC TGACATGCTG
ATGTCTCTGT CGGAGATGAC TTTGACCCAT CAGATGGCCC GTTTGGTGCT GCTTGAGCAG
TTGTATCGCG GTTTTACCAT TGTGAGAAAC GAGCCGTACC ATAACCGTTG A
 
Protein sequence
MKICLLCVGR LSIGYLREGA ADFEARLQRY LPVRIVELKE EKSGKNDAEY IRRQEGRRIL 
EKIPAGSFVI ALDERGRSVS SEKLAALLER HMMESTPELT LIIGGAYGLC DEVKQRADML
MSLSEMTLTH QMARLVLLEQ LYRGFTIVRN EPYHNR