Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2218 |
Symbol | rnhB |
ID | 3724930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2592294 |
End bp | 2592923 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637751819 |
Product | ribonuclease HII |
Protein accession | YP_357627 |
Protein GI | 77919812 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000000000329039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGAGC TTTTTCCTTC TGAAGATGTA TCACCCCTGT ACTTTGAACA ACGCCTGAGC CGTCAGGGGT ACCGCAGGAT TGCCGGTATC GATGAAGCCG GTCGGGGTCC CTTGGCCGGG CCGGTGGTCG CCGCCGCTGT TGTTCTCCCG CCCGTATTCG ATCTTCCCGG CCTGAACGAT TCCAAAAAAA TATCCGCCAA ACTTCGCGAA AAGCTGTTTC CGCAGATCCG CCGACAGGCC CTCGATTACG GTATCGGACT CGCCAGTGCG CAGGAGGTTG ATGGGCTCAA CGTTCTGCAG GCGACTTTGT TGGCCATGCG GCGTGCCCTC GACCGCCTGG CCCAACCCGC CGATTATCTG CTGGTCGATG GCATTACCCC GGTGCCCTTG CCGCTACCGC AGAAAACCCT CAAGCAGGGG GATAGTCGAT CCTTGTCTAT CGCCGCCGCT TCGGTGCTGG CTAAAGTGGT GCGTGATCGT TTGATGACGA CCTACGATGC GCGTTTTCCC GAATATGGAT TTGCCGGACA CAAGGGATAT GGCAGTGCCG CGCACCGTGC AGCCATTGCG CGGTTGGGTC CCTGTCCGTT GCATCGCGCA ACCTTTCGCG GCGTGCGAGA ATACCTGTGA
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Protein sequence | MLELFPSEDV SPLYFEQRLS RQGYRRIAGI DEAGRGPLAG PVVAAAVVLP PVFDLPGLND SKKISAKLRE KLFPQIRRQA LDYGIGLASA QEVDGLNVLQ ATLLAMRRAL DRLAQPADYL LVDGITPVPL PLPQKTLKQG DSRSLSIAAA SVLAKVVRDR LMTTYDARFP EYGFAGHKGY GSAAHRAAIA RLGPCPLHRA TFRGVREYL
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