Gene Pcar_2178 details

Gene Information

• Locus tag: Pcar_2178
• ID: 3724870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2543132
• End bp: 2543578
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637751779
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_357587
• Protein GI: 77919772
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: 95
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TTCTTGTCCT GCACGGAATC AATCTCAATA TGTTCGGCAA ACGGGACCCC 
GCCCACTACG GCACCACTAC CCTTAAAGAA ATCGATGCCC GCATCTCTGA ATGGGCTGCG 
GAGCTCGGTT TCGAGGTCGA ATGCTTTCAG ACCAACCATG AAGGTGAAAT GGCTTCTCGA 
ATCCATGCGG CGCATGAAGA AAACGTCGAC GCCGTCGTCA TCAACGCCGG AGCCTGGACC 
CATTACAGCT ATGGCATTGC CGACGCCCTG GCTATCCTGA AGGCACCGAT CGTCGAAGTA 
CACATGTCCA ATATTCATGC CCGGGAAGAG TTCCGCCATC ATTCCGTCAT TGCCGGCCTG 
GCCAAAGGTC AGATCTGCGG CTTTGGCGTC GACAGCTATC ATCTTGGACT GATCGCCGCG 
TCGAATCTGA TCAAAGTTGA AAACTGA 

 

Protein sequence

MKKVLVLHGI NLNMFGKRDP AHYGTTTLKE IDARISEWAA ELGFEVECFQ TNHEGEMASR 
IHAAHEENVD AVVINAGAWT HYSYGIADAL AILKAPIVEV HMSNIHAREE FRHHSVIAGL 
AKGQICGFGV DSYHLGLIAA SNLIKVEN