| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1559 |
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| Symbol | truB |
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| ID | 3724258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1824265 |
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| End bp | 1825185 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637751154 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_356974 |
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| Protein GI | 77919159 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000000014697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGGTA TCCTTATTGT CGATAAGCCG CAGGGGATGA CCTCCCATGC TGTGGTAGGA
CGTATCAGGC GCCTGTTCGG TTTGCGTAAG GTCGGACATG CCGGTACCCT CGACCCTCTG
GCTACCGGTG TCTTGGTAGT GGCCCTCGGT CAGGCTACCC GGATCCTTCA GTTCCTTATG
CAGGAAAATA AGGTTTACCG CGCGTCGCTG GTTCTCGGCA AGACCACCGA TACTCAGGAT
TCCGAAGGGC AGATTGTGGC TACCAGCGAT CCGGGACACA TCGATGCGCA GTCTGTAGCC
GATGTCTGTC ATAGCATGGT TGGCAGTTAC GATCAGATGC CTCCTATGTA TTCGGCGCTG
AAAAAGGATG GGGTGCCGCT ATATAAACTC GCCAGGCAAG GTGTGGAGGT CAGCCGCAAA
CCCAGACGTA TCACGATTTT TGATCTGCAA TTATTGGCTG TCGAGCCTCC GAATATCACC
TTCGATGTGC ATTGTTCGAA GGGGACTTAT GTTCGTACTA TCTGCCATGA TATCGGTGTT
AAACTCGGTT GCGGCGCACA CTTGACAGCT CTGCGACGTC TGCGAAGCGC TCCTTTTGAC
GTCAAGGAAG CCGTCACCCT GGAAGCCATT GAATTGATGG CTCCTGAGGA TCGTCCGGAA
CTGCTTTTGT CGATTGCCGA AGCGCTTCGG GAATATCCGT CCCTGAATGT TTGCCCGGAG
GGTATAAAAC GTCTTGGTTA CGGCATTCCT CCCACGGCGG ATATGATAGC GGATACAATC
GATTTCGAAG AGGGAACCCA GGTTTTACTT GTGGGTCCCG GGGGAGCGCT CGCCATGGCG
ACATACGTGC CTTCGAGGGC GCGGGAAAGC CGTGGCGATT TTGAGTTGTT GCGGGTTTTT
AATGATGGCG GTAGCTCTTA A
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| Protein sequence | MNGILIVDKP QGMTSHAVVG RIRRLFGLRK VGHAGTLDPL ATGVLVVALG QATRILQFLM
QENKVYRASL VLGKTTDTQD SEGQIVATSD PGHIDAQSVA DVCHSMVGSY DQMPPMYSAL
KKDGVPLYKL ARQGVEVSRK PRRITIFDLQ LLAVEPPNIT FDVHCSKGTY VRTICHDIGV
KLGCGAHLTA LRRLRSAPFD VKEAVTLEAI ELMAPEDRPE LLLSIAEALR EYPSLNVCPE
GIKRLGYGIP PTADMIADTI DFEEGTQVLL VGPGGALAMA TYVPSRARES RGDFELLRVF
NDGGSS
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