Gene Pcar_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1446 
SymbolribE 
ID3723818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1691193 
End bp1691843 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID637751039 
Productriboflavin synthase subunit alpha 
Protein accessionYP_356862 
Protein GI77919047 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACCG GTCTGATCGA AGATCTTGGC GTTCTGAAAC GGTTTCAGAA AACGGCTCAA 
AGTGGCAAAA TTACAGTGGC TACCGCTATT CCCATGGCTG AAATCGTTAT GGGTGAAAGC 
ATTGCCGTTA ACGGTGTCTG TCTGACCGTT ACCGATTTTG GTAACGGTAC ATTCACTGCG 
GATGTATCCC CGGAGAGCCT TTCCAGAACC AATCTTGGCC AGTTGCAAGC CGGTAGTCGG 
GTCAATCTTG AACGGGCGCT AAAGCTTTCC GACAGGCTTG GGGGCCATAT TGTCAGCGGG 
CATGTCGACG CGCTGGGTTT GGTTACGAAA CGATTCCAGG ATCAGAATGC CGTGCGCTTC 
ACCATTGAGG TTGCCGAGTC GCAGATGCGC TTGTTGGTAG AAAAAGGCTC TGTCACTGTC 
GATGGTATCA GTTTGACCGT CAATTCGGTT GCCGAGCGGA GTTTCGGTAT TGCGGTGATT 
CCTCATTCTT TGTCCAAAAC GACCTTGCAA TGGTGTGAGC CCGGCACTCA GGTGAATATC 
GAAACCGACA TTCTGGGGAA ATATGTCGAG CGCCTGTTGC GCCCGGCCGC AACCGATACC 
GAACAGGGGT CCATCAGCCT GGACTTTCTT GCCAAAAACG GGTTTTTATA A
 
Protein sequence
MFTGLIEDLG VLKRFQKTAQ SGKITVATAI PMAEIVMGES IAVNGVCLTV TDFGNGTFTA 
DVSPESLSRT NLGQLQAGSR VNLERALKLS DRLGGHIVSG HVDALGLVTK RFQDQNAVRF 
TIEVAESQMR LLVEKGSVTV DGISLTVNSV AERSFGIAVI PHSLSKTTLQ WCEPGTQVNI 
ETDILGKYVE RLLRPAATDT EQGSISLDFL AKNGFL