Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1006 |
Symbol | |
ID | 3723984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1177685 |
End bp | 1178917 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637750598 |
Product | aspartate kinase |
Protein accession | YP_356427 |
Protein GI | 77918612 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000000423126 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTGG TAGTACAGAA GTATGGGGGG ACATCGGTCG GTGATGTTGA CCGGATCCGC AATGTCGCCC GGCGCGTTGC CAAAACCTAC GACGACGGAA ATGACGTGGT CGTGGTTGTG TCGGCTATGT CCGGAGAAAC CAATAAACTG GTGGCTCTGG CCAATGAATT ATGCGATTTT CCCAGTGAAC GTGAATATGA CGTACTGGTG TCGACGGGCG AACAGGTGAC TATTGCTTTG CTTTCCATGT GTTTGCAGTC CATGGGTTAC AAGGCAAAAA GTTATCTGGG CCATCAGATT CCCATCTTTA CGGACAGCAC TTTCAGCAAG GCGCGTATCG AAAGCATCGA CGACAAGAAT ATCCGTGAAG ATCTCAATAA CGGCACGATC ATTGTCGTAG CCGGTTTCCA GGGTATCGAC CATGACGGCA ACCTCACCAC CCTGGGACGG GGCGGTTCCG ACACCTCCGC CGTCGCGGTG GCCGCCGCTC TTAAAGCCGA TGTCTGTGAG ATTTATACCG ATGTGGACGG CGTCTATACG ACCGATCCCC GGATTGTGGC GGATGCCACC AAAATCGAGA AAATTTCCTA CGACGAGATG CTCGAAATGG CTTCCCTCGG AGCCAAGGTA TTACAGATAC GTTCGGTGGA ATTCGCCAAA AAATACGGCG TGATCGTGCA CGTGCGTTCC AGTTTTAACG ATAATCCAGG GACCCTGGTT ACCAAGGAGG ACGAGGATAT GGAAACCGTT CTGGTTTCGG GCGTTACATA CAATAAAGAC GAAGCGAAGA TTTCCGTGAT GGGTGTGCCT GACAAGCCTG GTGTCGCCGC CAAGCTGTTC ACTCCCCTGA CCACTTCGAA TATTACCGTT GACATGATTA TCCAGAATGT GTCCAACGAC GGACTTACCG ATCTGACTTT CACAGTGCCG CGCGGCGATT TCAAGAAGGC TCTCAAGGCC GTCGAGGAAA CCGCCCGGGA AATCGGTGCG GCCGGTGTGC GCAGCGATGA AAATATCGCC AAGGTATCCA TTGTCGGGGT CGGAATGCGT TCCCACTCCG GGATTGCCAG CAAGATGTTC CGGGTTCTTT CCCAGGAAGG TATCAACATC CAGATGATCT CAACCAGCGA GATCAAAGTT TCCTGTGTTA TTGATGCCAA ATATACGGAA TTGGCAATTC GTGTACTGCA CCAGGCTTTT GGTCTGGATA AAAAAGATAG CAAGGCCGAA TAA
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Protein sequence | MALVVQKYGG TSVGDVDRIR NVARRVAKTY DDGNDVVVVV SAMSGETNKL VALANELCDF PSEREYDVLV STGEQVTIAL LSMCLQSMGY KAKSYLGHQI PIFTDSTFSK ARIESIDDKN IREDLNNGTI IVVAGFQGID HDGNLTTLGR GGSDTSAVAV AAALKADVCE IYTDVDGVYT TDPRIVADAT KIEKISYDEM LEMASLGAKV LQIRSVEFAK KYGVIVHVRS SFNDNPGTLV TKEDEDMETV LVSGVTYNKD EAKISVMGVP DKPGVAAKLF TPLTTSNITV DMIIQNVSND GLTDLTFTVP RGDFKKALKA VEETAREIGA AGVRSDENIA KVSIVGVGMR SHSGIASKMF RVLSQEGINI QMISTSEIKV SCVIDAKYTE LAIRVLHQAF GLDKKDSKAE
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