Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3681 |
Symbol | stcD2 |
ID | 3722170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007494 |
Strand | + |
Start bp | 801322 |
End bp | 803388 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640073354 |
Product | putative NADH-dependent oxidase |
Protein accession | YP_355191 |
Protein GI | 77465688 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0197334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCATC CGTCCCGCCA AGGAGTCTCC CATGTCGAAC GACCCCCTCC TCCAGCCCTA CCGGCTCAAG CATCTCACGC TGCGCAACCG CATCCTCATC ACCAGCCACG AGCCCGCCTA TCCCGAGGAC GGGATGCCGA AGGACCGCTA TCGCGCCTAT CATGTCGAGC GGGCGAAGGC GGGCGTGGCC CTGACCATGA CGGCGGGATC GGCCAGCGTC TCGCGCGACA GTCCGCCCGT CTTCAACAAC GTCCTGGTCT GGAAGGACGA GGTGGTCGGC TGGATGAAAA AGCTTGCCGA CGAATGCCAC GACCATGGCG CGGCGGTGAT ATCCAGCTCA CCCATCTCGG GCGGCGCACG CGGTGGGACA AGGGCGACTG GCTTCCGGTG GTGGCGCCGA GCCACGAGCG CGAGGCGGCC CACCGCGCCT TCCCCAAGCG GATGGAGGAG TGGGACATCG CCCGCATCGT GGGCGACTTC GCCGACGCGG CCGAGCGGAT GAAGGCGGCG GGCCTCGACG GGATCGAGCT CGAAGCCTAC GGCCACCTGC TCGAGCAGTT CTGGTCGCCT CTGACCAACG ATCTCGAGGC GCCGTGGGGT GGCAGCCTCG AGAACCGGTT GCGCTTCACC TTCGAGGTGC TCGGCGCGAT CCGCAGGCGC GTAGGGCCCG ATTTCATCGT GGGCGTCCGC TACACGGGCG ATCAGGATCT GGCGGGGGGG ATGGGCCCGG CCGAGGGGCT CGAGGTCTCG CGCCGGCTGA AGGAGAGCGG GTTGATCGAT TTCCTGAACG TCGTGAAGGG ACATATCGAC ACCGACCCCG GCCTTACCGA CCTGATCCCG ATCCAGGGGA TGCGCAGCGC GCCCCATCTC GATTTCGCGG GCGAGATCCG CGCCGCCACC GGTTTCCCCA CCTTCCATGC GGCGCGCATT CCCGACGTGG CAACCGCGCG CCACGCCATT GCCAGCGGCA AGCTCGACAT GGTGGGCATG ACGCGCGCCC ACCTGGCCGA CCCGCATCTC GTGCGCAAGA TCGTCGAAGG CCGCGAAGAC GACATCCGCC CCTGCGTCGG CGCGAACTAC TGCCTCGACC GGATCTATCA GGGCGGCATG GCGCTCTGCC TGCACAACCC CTCCAGCGGG CGCGAGATCG AGCAGCCCCA CGAGATCGCC CCTGCCCCGG TAAAAAAACG TATCACCGTG GTGGGCGCCG GCCCGGCCGG CCTCGAGGCC GCGCGCGTGG CCGGCAGCCG GGGACATGCG GTGACGGTGT TCGAAGCGGC GTCCGAGGCC GGCGGTCAGC TGCGGCTCGC CGCGCGGCAG GAGCGACGGC GCGAGATGAT GTCCATAGTG GGCTGGCGTC TCGACCAGTG CGGCAAGCTG GGGGTGAAAT TTCATTTCAA CAGCTTCGCC GAGGCCGAGG CGGTGCTTGC GACAGAGCCC GATGCGGTCA TCGTGGCCAC CGGGGGCCTG CCGCATACCG AGGTGCTGGA AGAGGGCAAC GACCTCGTCT GCTCGGCCTG GGACATCCTC TCGGGCGATG TGAAACCGGG TGCCAGCGCC CTCGTCTTCG ACGATGCGGG CGATCATGCG GGGCTTCAGG CGGCCGACCT CATAGCCGCG ACCGGAGCCG CGGTCGAGGT CGTGACACCC GACCGCAGCT TCGCACCCGA GGTGATGGCG ATGAACCTCG TGCCCTACAT GCGCAGCCTG CAGGCGCGCG ACGCAACCTT CACCGTGACA TGGCGCCTCA AGTCGGTCCG GCGCGAAGGC AACCGCCTGC GCGCGGTGCT GGGCAGCGAC TACGGCCCCA TGCTGCGGGA CCGGCTGGTC GATCAGGTGG TGGTCAACCA CGGCACGCGG CCGCTCGACG ATCTCTATTT CGAGCTGAAG CCGCTCTCGT CGAACCTGGG CGAGGTAGAT TACGACGCCC TTGCCACGGG GGGCTCGCAG GAGCGGCTGA TCAATCCCGA GGGCCGCTTC CGCCTCTACC GGATCGGAGA CGCGGTGGCT GCGCGCAACA CCCACGCCGC GATCTATGAC GCGCTGCGGC TGGTGCGCGA CCTCTGA
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Protein sequence | MMHPSRQGVS HVERPPPPAL PAQASHAAQP HPHHQPRARL SRGRDAEGPL SRLSCRAGEG GRGPDHDGGI GQRLARQSAR LQQRPGLEGR GGRLDEKACR RMPRPWRGGD IQLTHLGRRT RWDKGDWLPV VAPSHEREAA HRAFPKRMEE WDIARIVGDF ADAAERMKAA GLDGIELEAY GHLLEQFWSP LTNDLEAPWG GSLENRLRFT FEVLGAIRRR VGPDFIVGVR YTGDQDLAGG MGPAEGLEVS RRLKESGLID FLNVVKGHID TDPGLTDLIP IQGMRSAPHL DFAGEIRAAT GFPTFHAARI PDVATARHAI ASGKLDMVGM TRAHLADPHL VRKIVEGRED DIRPCVGANY CLDRIYQGGM ALCLHNPSSG REIEQPHEIA PAPVKKRITV VGAGPAGLEA ARVAGSRGHA VTVFEAASEA GGQLRLAARQ ERRREMMSIV GWRLDQCGKL GVKFHFNSFA EAEAVLATEP DAVIVATGGL PHTEVLEEGN DLVCSAWDIL SGDVKPGASA LVFDDAGDHA GLQAADLIAA TGAAVEVVTP DRSFAPEVMA MNLVPYMRSL QARDATFTVT WRLKSVRREG NRLRAVLGSD YGPMLRDRLV DQVVVNHGTR PLDDLYFELK PLSSNLGEVD YDALATGGSQ ERLINPEGRF RLYRIGDAVA ARNTHAAIYD ALRLVRDL
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