| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3188 |
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| Symbol | |
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| ID | 3721480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 242304 |
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| End bp | 243878 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640072865 |
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| Product | ApbE family protein |
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| Protein accession | YP_354705 |
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| Protein GI | 77465202 |
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| COG category | [H] Coenzyme transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis
[COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGCG CCGGCACCCC GGCCGATCCG CGCCTGCTGC GCGAACGGCT GAGGGTGGTC
GCCGCACCTG CCGGGCGCTT GCGGCTCACG GCCCCGCGCG CCGCGGGCTG CGCCGGCTGC
GGCGCGCGCG CGGCCTGCGG CGGGGCGGCG GCCTCCGGCC CCGCCCGGCT GCTCGAGATC
GCCTGCCCGC CGGACCTCGC GCCCCGGCCC GGCGATGAGG TCGAAGTCGC TCTGTCCGGC
GGGCGCTTCC TCGCGGCGGT GGGGCTGGCC TATCTGCTGC CCACGCTGGC GGTCGTGATC
GCGGCCGGCG CGGGGCTGGC GCTGCAGCTG TCCGATCTGG GCGTGGCGCT CCTGCTGCCT
GCCCGCCCTT GCGCTCTCGC TCATCCCCCT TGCCCTCGCC GGCCGGGGCG AGGGGCTGAC
AGAGGCGCTC CGCGTCGAGG CCCTCCACCC CGCCGGGCCT TCCGAACCCG ACCCATGCGG
ACCGTGACCC TCCCGCGCCG GGCCTTCCTT GCTACCCTCG CCGCGCTCGC GCTCGGCGGG
GTGGCGGCCC TGCGCCTCGA GCCCGCCTCG GACGTTCGCG AGACCTTCTA TCTCTTCGGC
ACGCTGGTAG AGATCGAGAC CCACGGCGTG CCCGAACGCA TGGCCCGCGC CGCCATCGCC
CGCGCGGGCC AGAGCCTTGA GGCCGCGCAT CGCGACTGGC ACGGCTGGCG GCCGGGCGAA
CTCGGGACCT TGAACACGGC CATCGCGGCG GGGCGCCCGC AGCGCGTGGA TGCGACCCTC
GCGGCCCTCC TGCGCAAGGG GCGCGCCCTC TCCTGTGCGA GCGGCGGGCT GTTCGATCCG
GCCATCGGCA GGCTGGTCGG CGCCTGGGGC TTTCACGCCG ACACATTGCC CGAGGGCGAT
CCGCCATCCG CCGCCGCCAT CGCGGCCCTC GTCGCGCGCC ACCCGCGCAT GACCGACCTG
CGCTTCGACG GCACCGAGGT GCGCTCGCTC AATCCCGCGG TTCAACTCGA TCTCGGGGCC
TATGCCAAGG GGGCGGCGCT CGAGATGGCG GCGGCCGAGC TTCGGGCGGC AGGCGTCGAG
GATGCGGTGC TGAACGCCGG CGGCGGTGTG CAGGTCATGG GCCGCCACGG CGCGCGGCCC
TGGCGGGTGG CGATCCGCGA TCCGTTCCAG TGGGGCGTGG TGGCGGGCGT TTCGCTCCGC
CCCGGCGAGG CCCTGCATAC GTCGGGCAAT TACGAGCGCT ATTTCGACCG CGGCGGTGTG
CGCTTCTCGC ACATCCTCGA TCCGCGGACG GGCCGTCCGA TGCAGGGCAT CGTCTCGGTC
TCGGTGCTCG ACACCGACGG CGCGCGGGCC GATGCCGCGG CCACCGCGCT CTGCATCGCG
GGCCGCGAGG CCTGGCCGCG GGTCGCGGCG GCGATGGGCG TGCGCGCCGT CCTGATGATC
GCGGACGATG GCGCGGTCTT CGCCACGCCC GAGATGATGG CGCGGCTCGA ACCGGCGCAG
GGCGGCTACC CCGCCCCGGT GCAGATCGTA TCGCTGCCGG AGGATGTCAC ACCGCCCGCC
TGTCCCGAGG ACTGA
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| Protein sequence | MAGAGTPADP RLLRERLRVV AAPAGRLRLT APRAAGCAGC GARAACGGAA ASGPARLLEI
ACPPDLAPRP GDEVEVALSG GRFLAAVGLA YLLPTLAVVI AAGAGLALQL SDLGVALLLP
ARPCALAHPP CPRRPGRGAD RGAPRRGPPP RRAFRTRPMR TVTLPRRAFL ATLAALALGG
VAALRLEPAS DVRETFYLFG TLVEIETHGV PERMARAAIA RAGQSLEAAH RDWHGWRPGE
LGTLNTAIAA GRPQRVDATL AALLRKGRAL SCASGGLFDP AIGRLVGAWG FHADTLPEGD
PPSAAAIAAL VARHPRMTDL RFDGTEVRSL NPAVQLDLGA YAKGAALEMA AAELRAAGVE
DAVLNAGGGV QVMGRHGARP WRVAIRDPFQ WGVVAGVSLR PGEALHTSGN YERYFDRGGV
RFSHILDPRT GRPMQGIVSV SVLDTDGARA DAAATALCIA GREAWPRVAA AMGVRAVLMI
ADDGAVFATP EMMARLEPAQ GGYPAPVQIV SLPEDVTPPA CPED
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