Gene Pfl01_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4782 
Symbol 
ID3716403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5392272 
End bp5392931 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content56% 
IMG OID 
Productparaquat-inducible protein A 
Protein accessionYP_350510 
Protein GI77461003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0653757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATT CGGTTGACGC CCCAGGGCTG TCAGATTTAC CGCTGGATGA CTTGGTGGCC 
TGTCATGAGT GCGATCTGCT GATGCGCAAG CCCAAGCTTG CTCACGGCGA AAAAGCCCTC
TGCCCACGCT GCGGTTACGA ACTCTACGCT CATCGTCATA ACGTGGTGCA GCGCAGTCTT
GCCCTGGTCA TTGCCGCGCT GTTGCTCTAT GTACCGGCGA ACTTTTTACC CATCATGCAG
CTCAATGTTC TCGGGCAATC GTCGCAGGAC ACGGTCTGGA GCGGTGTGAT CGGCCTGTTC
AACACCGATA TGCGCGGTGT TTCGGTTGTC GTATTCCTTT GCAGCATGGC GATTCCACTG
TTGAAACTGT TGTGTCAGTT GATCGTGTTG CTGACGATCC GTTTCAACAT CGGACGCAGT
TATGGCCTGC TGCTCTACCG CATTTATCAC CACCTCAAAG ACTGGGGCAT GCTCGAGGTC
TACCTCATGG GCGTCCTGGT CGCGATCGTC AAACTGGCGG ACATGGCGGC TATCACCGTG
GGCCTCGGTC TGGCATGTTT CATCGGCTTG TTACTGGTTC AGGTCTGGCT CGAAGTGGTG
ATGTCACCGC ACCAGATCTG GCAGGCGTTA TCAGGAGAAG ATGCCCATGC GGGCGATTGA
 
Protein sequence
MSDSVDAPGL SDLPLDDLVA CHECDLLMRK PKLAHGEKAL CPRCGYELYA HRHNVVQRSL 
ALVIAALLLY VPANFLPIMQ LNVLGQSSQD TVWSGVIGLF NTDMRGVSVV VFLCSMAIPL
LKLLCQLIVL LTIRFNIGRS YGLLLYRIYH HLKDWGMLEV YLMGVLVAIV KLADMAAITV
GLGLACFIGL LLVQVWLEVV MSPHQIWQAL SGEDAHAGD