Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4782 |
Symbol | |
ID | 3716403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5392272 |
End bp | 5392931 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | paraquat-inducible protein A |
Protein accession | YP_350510 |
Protein GI | 77461003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0653757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATT CGGTTGACGC CCCAGGGCTG TCAGATTTAC CGCTGGATGA CTTGGTGGCC TGTCATGAGT GCGATCTGCT GATGCGCAAG CCCAAGCTTG CTCACGGCGA AAAAGCCCTC TGCCCACGCT GCGGTTACGA ACTCTACGCT CATCGTCATA ACGTGGTGCA GCGCAGTCTT GCCCTGGTCA TTGCCGCGCT GTTGCTCTAT GTACCGGCGA ACTTTTTACC CATCATGCAG CTCAATGTTC TCGGGCAATC GTCGCAGGAC ACGGTCTGGA GCGGTGTGAT CGGCCTGTTC AACACCGATA TGCGCGGTGT TTCGGTTGTC GTATTCCTTT GCAGCATGGC GATTCCACTG TTGAAACTGT TGTGTCAGTT GATCGTGTTG CTGACGATCC GTTTCAACAT CGGACGCAGT TATGGCCTGC TGCTCTACCG CATTTATCAC CACCTCAAAG ACTGGGGCAT GCTCGAGGTC TACCTCATGG GCGTCCTGGT CGCGATCGTC AAACTGGCGG ACATGGCGGC TATCACCGTG GGCCTCGGTC TGGCATGTTT CATCGGCTTG TTACTGGTTC AGGTCTGGCT CGAAGTGGTG ATGTCACCGC ACCAGATCTG GCAGGCGTTA TCAGGAGAAG ATGCCCATGC GGGCGATTGA
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Protein sequence | MSDSVDAPGL SDLPLDDLVA CHECDLLMRK PKLAHGEKAL CPRCGYELYA HRHNVVQRSL ALVIAALLLY VPANFLPIMQ LNVLGQSSQD TVWSGVIGLF NTDMRGVSVV VFLCSMAIPL LKLLCQLIVL LTIRFNIGRS YGLLLYRIYH HLKDWGMLEV YLMGVLVAIV KLADMAAITV GLGLACFIGL LLVQVWLEVV MSPHQIWQAL SGEDAHAGD
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