Gene Pfl01_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3479 
Symbol 
ID3713662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3961753 
End bp3962088 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349208 
Protein GI77459701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000156822 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0075095 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAGTCTTT TCTATCAAGA ACCAACAGTG AACCACGATG AAGCAGTGAG GATTCTTGAA 
AGCGGCGTGG AAAGGAATGT TGTCGCTGGA TTGATTTCTA TTGGCTTGAA CGAATCAGAC
AGAATCTGGG CTCAGCAAAC CTGCCTGAAG TATTTCGCCA GCAGCAATGA GTCGGTTGTC
GCATCTGCCA TTACCGCTTT GGGCCACATT GCTCGAAGGC ACGGCAAACT GGACAAAGAC
ATTGCCTTCG CGGCCCTGGA AGAAGTAAAG ACAAGATTCC CCTCCCTGGA AGGCGTGATC
GCAGACACGC TTGACGATAT TGAGGCATTC ACCTGA
 
Protein sequence
MSLFYQEPTV NHDEAVRILE SGVERNVVAG LISIGLNESD RIWAQQTCLK YFASSNESVV 
ASAITALGHI ARRHGKLDKD IAFAALEEVK TRFPSLEGVI ADTLDDIEAF T