Gene Pfl01_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3034 
Symbol 
ID3712718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3471454 
End bp3473181 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348763 
Protein GI77459256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.877854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.900283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTC TGTTTCGCCA CAAAAGGCAG AAGCCCCCTC CGCCACCGAC CGTCAACGTC 
GCCGAAGGTT ACCTGTCCAT CGAGTCAGCC CATACCCTCT TAGCAGTGGA GCACCGCCGT
CAGTTGCTCG ATCGCATCTG GCAATGCACC GCCCTCTCCC ACGTCCAATT CACCCAGTTC
TACTTAAATC CGATCCATCG CTACGCCGAA CAGGTCCAGC AACTCCCGGC CAGCGAGACG
CACCACCATG CGTATCTCGG TGGCATGCTC GACCATGGCC TGGAGCTGGT CGCTTGCAGT
TTGAAACTGC GTCAGTCATA TCTGCTTCCC ACCGGCGCTG CGCCCGAAGA CCAGGCCGCC
CAGACTGACG CCTGGTCCGC CGGCATCGCC TATGGCGCGC TGCTGCATGA CATTGGCAAG
ATCGCCGTGG ACCTGCTGGT CGAACGCCAG GATGGCCGTG TTTGGCATCC TTGGCAGGGC
TCCCTGGATC AGCCCTACCG TTTTCGTTAC ATCAAGGGTC GTGACTACCA CCTGCACGGC
GCTGCCGCAG GCTTGCTTTA CACCCAAATT CTCGACCGCC CAATCCTCGA TTGGCTCAGT
GGATTTCCGC CACTGTGGGC CAGTCTGCTG TATGTCCTGG CGGGCCAGTA CGAACGTGCC
GGCGTGCTCG GTGAGTTGGT GATGCAGGCC GACCGTGTTT CCACCGCACA GAACATCGGA
GGTAACCCGA GCAAGGCGCT GCAAGCGCCG ATTCATTCGC TGCAACATCA CTTGATCAGC
GGACTACGTC ATCTGGTTCA GCACGAGCTG AAACTCAACC AGCCAGGTGC CGCGGGTTGG
TTGACTCAAG ACGCACTCTG GCTGGTCAGC AAGACGGTCA CGGACAAGCT GCGAGCCTAT
CTGCTGTCGC AATCGATTGA GGGCATTCCT TCATCCAACA TCACGGTGTT CGACGAACTC
CAGTCGCATG GGCTGGTCGA GTCTACCCCG GAAGGCAAAG CCATCTGGAC CGCGCTCGTT
GCGCAGGGAA ACTGGCAGCA GAGTTTTACT TTTCTGCGCC TTCAACCGGC GTTGATCTGG
GGGAGCGACA ACCGACCTGA GGTTTTCAGC GGAACGGTAA GCGTGGCAGT CGATGACCAT
CCAACTGACG CATCGGCATC ACCAGCAGCG CCCAAGACTG TCAGTACAGA ATCGTGTCAA
AGCCCATCGC AGCCCGAGCC ACTGCAGATG GAGGATGCCG ACTGCCTCGG ATCTTTGCTG
GATATGTTCG AAATAGGAGA ACCCGAGGTG CGTGAAACGC CCTCAGAAAA TGCTCTCGAA
GTCTTAAGCT CCCCTTCGGA CAACCCAGGT CAGGTTTTCC TGAATTGGGT CAAGGAAGGC
ATCCAGAGCC ACAAGCTGAT CATCAACGAC GGCAAGGCTA AAATACACAC GGTGAGCGGT
ACTGTATTTC TTGTAACACC GGGTCTTTTC CAACGTTATG CCCAGGAGTT TCCTGGCATC
TCCAAGGGTG TCGATCAAGA GATTGAAGAA TGGCGTTGGG TGCAGAAGCA GTTCGAGAAA
TTGAAGATCC ATAGAAAACG CACTGATGGT TTGAACATCT GGTCTTGTCA GGTCGAAGGC
CCTCGAAAGA AGGCAAAACT CAAAGGTTAT CTGCTAGAAA ACCGGACACT TTTGCTCGAC
ACGGGATCGG TAGTCGACAA TCCTTTTCTA AAAATCGAAA TAGATTAA
 
Protein sequence
MLSLFRHKRQ KPPPPPTVNV AEGYLSIESA HTLLAVEHRR QLLDRIWQCT ALSHVQFTQF 
YLNPIHRYAE QVQQLPASET HHHAYLGGML DHGLELVACS LKLRQSYLLP TGAAPEDQAA
QTDAWSAGIA YGALLHDIGK IAVDLLVERQ DGRVWHPWQG SLDQPYRFRY IKGRDYHLHG
AAAGLLYTQI LDRPILDWLS GFPPLWASLL YVLAGQYERA GVLGELVMQA DRVSTAQNIG
GNPSKALQAP IHSLQHHLIS GLRHLVQHEL KLNQPGAAGW LTQDALWLVS KTVTDKLRAY
LLSQSIEGIP SSNITVFDEL QSHGLVESTP EGKAIWTALV AQGNWQQSFT FLRLQPALIW
GSDNRPEVFS GTVSVAVDDH PTDASASPAA PKTVSTESCQ SPSQPEPLQM EDADCLGSLL
DMFEIGEPEV RETPSENALE VLSSPSDNPG QVFLNWVKEG IQSHKLIIND GKAKIHTVSG
TVFLVTPGLF QRYAQEFPGI SKGVDQEIEE WRWVQKQFEK LKIHRKRTDG LNIWSCQVEG
PRKKAKLKGY LLENRTLLLD TGSVVDNPFL KIEID