Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3034 |
Symbol | |
ID | 3712718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3471454 |
End bp | 3473181 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348763 |
Protein GI | 77459256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.877854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.900283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGTC TGTTTCGCCA CAAAAGGCAG AAGCCCCCTC CGCCACCGAC CGTCAACGTC GCCGAAGGTT ACCTGTCCAT CGAGTCAGCC CATACCCTCT TAGCAGTGGA GCACCGCCGT CAGTTGCTCG ATCGCATCTG GCAATGCACC GCCCTCTCCC ACGTCCAATT CACCCAGTTC TACTTAAATC CGATCCATCG CTACGCCGAA CAGGTCCAGC AACTCCCGGC CAGCGAGACG CACCACCATG CGTATCTCGG TGGCATGCTC GACCATGGCC TGGAGCTGGT CGCTTGCAGT TTGAAACTGC GTCAGTCATA TCTGCTTCCC ACCGGCGCTG CGCCCGAAGA CCAGGCCGCC CAGACTGACG CCTGGTCCGC CGGCATCGCC TATGGCGCGC TGCTGCATGA CATTGGCAAG ATCGCCGTGG ACCTGCTGGT CGAACGCCAG GATGGCCGTG TTTGGCATCC TTGGCAGGGC TCCCTGGATC AGCCCTACCG TTTTCGTTAC ATCAAGGGTC GTGACTACCA CCTGCACGGC GCTGCCGCAG GCTTGCTTTA CACCCAAATT CTCGACCGCC CAATCCTCGA TTGGCTCAGT GGATTTCCGC CACTGTGGGC CAGTCTGCTG TATGTCCTGG CGGGCCAGTA CGAACGTGCC GGCGTGCTCG GTGAGTTGGT GATGCAGGCC GACCGTGTTT CCACCGCACA GAACATCGGA GGTAACCCGA GCAAGGCGCT GCAAGCGCCG ATTCATTCGC TGCAACATCA CTTGATCAGC GGACTACGTC ATCTGGTTCA GCACGAGCTG AAACTCAACC AGCCAGGTGC CGCGGGTTGG TTGACTCAAG ACGCACTCTG GCTGGTCAGC AAGACGGTCA CGGACAAGCT GCGAGCCTAT CTGCTGTCGC AATCGATTGA GGGCATTCCT TCATCCAACA TCACGGTGTT CGACGAACTC CAGTCGCATG GGCTGGTCGA GTCTACCCCG GAAGGCAAAG CCATCTGGAC CGCGCTCGTT GCGCAGGGAA ACTGGCAGCA GAGTTTTACT TTTCTGCGCC TTCAACCGGC GTTGATCTGG GGGAGCGACA ACCGACCTGA GGTTTTCAGC GGAACGGTAA GCGTGGCAGT CGATGACCAT CCAACTGACG CATCGGCATC ACCAGCAGCG CCCAAGACTG TCAGTACAGA ATCGTGTCAA AGCCCATCGC AGCCCGAGCC ACTGCAGATG GAGGATGCCG ACTGCCTCGG ATCTTTGCTG GATATGTTCG AAATAGGAGA ACCCGAGGTG CGTGAAACGC CCTCAGAAAA TGCTCTCGAA GTCTTAAGCT CCCCTTCGGA CAACCCAGGT CAGGTTTTCC TGAATTGGGT CAAGGAAGGC ATCCAGAGCC ACAAGCTGAT CATCAACGAC GGCAAGGCTA AAATACACAC GGTGAGCGGT ACTGTATTTC TTGTAACACC GGGTCTTTTC CAACGTTATG CCCAGGAGTT TCCTGGCATC TCCAAGGGTG TCGATCAAGA GATTGAAGAA TGGCGTTGGG TGCAGAAGCA GTTCGAGAAA TTGAAGATCC ATAGAAAACG CACTGATGGT TTGAACATCT GGTCTTGTCA GGTCGAAGGC CCTCGAAAGA AGGCAAAACT CAAAGGTTAT CTGCTAGAAA ACCGGACACT TTTGCTCGAC ACGGGATCGG TAGTCGACAA TCCTTTTCTA AAAATCGAAA TAGATTAA
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Protein sequence | MLSLFRHKRQ KPPPPPTVNV AEGYLSIESA HTLLAVEHRR QLLDRIWQCT ALSHVQFTQF YLNPIHRYAE QVQQLPASET HHHAYLGGML DHGLELVACS LKLRQSYLLP TGAAPEDQAA QTDAWSAGIA YGALLHDIGK IAVDLLVERQ DGRVWHPWQG SLDQPYRFRY IKGRDYHLHG AAAGLLYTQI LDRPILDWLS GFPPLWASLL YVLAGQYERA GVLGELVMQA DRVSTAQNIG GNPSKALQAP IHSLQHHLIS GLRHLVQHEL KLNQPGAAGW LTQDALWLVS KTVTDKLRAY LLSQSIEGIP SSNITVFDEL QSHGLVESTP EGKAIWTALV AQGNWQQSFT FLRLQPALIW GSDNRPEVFS GTVSVAVDDH PTDASASPAA PKTVSTESCQ SPSQPEPLQM EDADCLGSLL DMFEIGEPEV RETPSENALE VLSSPSDNPG QVFLNWVKEG IQSHKLIIND GKAKIHTVSG TVFLVTPGLF QRYAQEFPGI SKGVDQEIEE WRWVQKQFEK LKIHRKRTDG LNIWSCQVEG PRKKAKLKGY LLENRTLLLD TGSVVDNPFL KIEID
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