Gene Pfl01_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2765 
Symbol 
ID3714506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3190613 
End bp3191773 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content54% 
IMG OID 
Productintegrase catalytic subunit 
Protein accessionYP_348496 
Protein GI77458990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.936307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA GACCTCGAAT CTATTACACC GAAATCCAGA AAAAACTGAT GTGGGATCAC 
TGGCAGAAAG GCGACTCTCT CCAGCACATA GCCCAACTAT TTGATCGAAA CCATTCATCG
ATACAGCGCA TTTTGGCGGA AACAGGCGGT ATCAGACCCT CTGTACGCCG CAGATCCAGA
TTGGCGCTGA CGTTGGCTGA GCGCGAAGAG ATTTCGCGTG CAGTGGTGGC AGGAAACTCG
ATCCGCTCCA TGGCCGCGCT GCTAGGGCGA GCAGCCTCTA CGATCAGTCG GGAGATCAGA
CGCAACGGTG GCCAAGGATG CTACCGGGCT AATCAAGCTG ATCAGGCTGC CTGGGATCGC
GCGCATCGAC CTAAGGTTTG CAAGCTTGTT GAGAACCGAA CAGTGGCGCA AATTGTTGCA
GACAAGCTTC AATTACAGTG GTCTCCGGAA CAAATTGCCG GTTGGTTGAA GCGTACCTAC
CCGGACGATG CGAGCTATCA GGTGTCACAC GAAACGATCT ATCGCACGCT CTTCATACAG
GCTCGCGGGG CTCTGAAGAA GGAGTTGCTT GAGCATTTAC GGCGCACGCG GGCCATGCGT
CGCTCGCGCC ATCACACGCA GAAGAAAGAA AATCACGGTC GAATTACTGA CGCGGTATCG
ATCCGCGAAC GCCCAGCCGC GGCTAAGGAT CGGGCGGTTC CGGGTCACTG GGAAGGCGAC
CTGCTGTGCG GTAGCAGGAA CAGCCAAATT GCCACTCTTG TTGAGCGACA TACCCGCTAC
GTAATGCTGG TGAAATTGGA CGGAAAGGAT AGCGAGACGG TCATCAGCGC CCTAATTGAA
AACGCCCGTA ACTTGCCCCA AGAACTCTAC AAATCGCTGA CCTGGGATCG CGGCAAAGAG
ATGGCTGACC ATAAACGCTT TACGGTGGCT ACCGACATCA AGGTCTACTT CTGCGATCCT
CATCGTCCTT GGCAACGAGG ATCAAATGAG AACACCAACG GGTTGTTAAG GCAGTACTTC
CTGAAAGGAA CCGACCTTGC GGAGCACTCG CAAGCCACGC TCAATGAAGT GGCAAGGCAG
CTAAATAGCC GCCCTCGGAA AACGCTAGAC TACGAAACAC CGGCAGAACG ATTTAGCCAA
TCTGTTGCGT CGACCGGTTG A
 
Protein sequence
MKQRPRIYYT EIQKKLMWDH WQKGDSLQHI AQLFDRNHSS IQRILAETGG IRPSVRRRSR 
LALTLAEREE ISRAVVAGNS IRSMAALLGR AASTISREIR RNGGQGCYRA NQADQAAWDR
AHRPKVCKLV ENRTVAQIVA DKLQLQWSPE QIAGWLKRTY PDDASYQVSH ETIYRTLFIQ
ARGALKKELL EHLRRTRAMR RSRHHTQKKE NHGRITDAVS IRERPAAAKD RAVPGHWEGD
LLCGSRNSQI ATLVERHTRY VMLVKLDGKD SETVISALIE NARNLPQELY KSLTWDRGKE
MADHKRFTVA TDIKVYFCDP HRPWQRGSNE NTNGLLRQYF LKGTDLAEHS QATLNEVARQ
LNSRPRKTLD YETPAERFSQ SVASTG