Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2765 |
Symbol | |
ID | 3714506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3190613 |
End bp | 3191773 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | integrase catalytic subunit |
Protein accession | YP_348496 |
Protein GI | 77458990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.936307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA GACCTCGAAT CTATTACACC GAAATCCAGA AAAAACTGAT GTGGGATCAC TGGCAGAAAG GCGACTCTCT CCAGCACATA GCCCAACTAT TTGATCGAAA CCATTCATCG ATACAGCGCA TTTTGGCGGA AACAGGCGGT ATCAGACCCT CTGTACGCCG CAGATCCAGA TTGGCGCTGA CGTTGGCTGA GCGCGAAGAG ATTTCGCGTG CAGTGGTGGC AGGAAACTCG ATCCGCTCCA TGGCCGCGCT GCTAGGGCGA GCAGCCTCTA CGATCAGTCG GGAGATCAGA CGCAACGGTG GCCAAGGATG CTACCGGGCT AATCAAGCTG ATCAGGCTGC CTGGGATCGC GCGCATCGAC CTAAGGTTTG CAAGCTTGTT GAGAACCGAA CAGTGGCGCA AATTGTTGCA GACAAGCTTC AATTACAGTG GTCTCCGGAA CAAATTGCCG GTTGGTTGAA GCGTACCTAC CCGGACGATG CGAGCTATCA GGTGTCACAC GAAACGATCT ATCGCACGCT CTTCATACAG GCTCGCGGGG CTCTGAAGAA GGAGTTGCTT GAGCATTTAC GGCGCACGCG GGCCATGCGT CGCTCGCGCC ATCACACGCA GAAGAAAGAA AATCACGGTC GAATTACTGA CGCGGTATCG ATCCGCGAAC GCCCAGCCGC GGCTAAGGAT CGGGCGGTTC CGGGTCACTG GGAAGGCGAC CTGCTGTGCG GTAGCAGGAA CAGCCAAATT GCCACTCTTG TTGAGCGACA TACCCGCTAC GTAATGCTGG TGAAATTGGA CGGAAAGGAT AGCGAGACGG TCATCAGCGC CCTAATTGAA AACGCCCGTA ACTTGCCCCA AGAACTCTAC AAATCGCTGA CCTGGGATCG CGGCAAAGAG ATGGCTGACC ATAAACGCTT TACGGTGGCT ACCGACATCA AGGTCTACTT CTGCGATCCT CATCGTCCTT GGCAACGAGG ATCAAATGAG AACACCAACG GGTTGTTAAG GCAGTACTTC CTGAAAGGAA CCGACCTTGC GGAGCACTCG CAAGCCACGC TCAATGAAGT GGCAAGGCAG CTAAATAGCC GCCCTCGGAA AACGCTAGAC TACGAAACAC CGGCAGAACG ATTTAGCCAA TCTGTTGCGT CGACCGGTTG A
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Protein sequence | MKQRPRIYYT EIQKKLMWDH WQKGDSLQHI AQLFDRNHSS IQRILAETGG IRPSVRRRSR LALTLAEREE ISRAVVAGNS IRSMAALLGR AASTISREIR RNGGQGCYRA NQADQAAWDR AHRPKVCKLV ENRTVAQIVA DKLQLQWSPE QIAGWLKRTY PDDASYQVSH ETIYRTLFIQ ARGALKKELL EHLRRTRAMR RSRHHTQKKE NHGRITDAVS IRERPAAAKD RAVPGHWEGD LLCGSRNSQI ATLVERHTRY VMLVKLDGKD SETVISALIE NARNLPQELY KSLTWDRGKE MADHKRFTVA TDIKVYFCDP HRPWQRGSNE NTNGLLRQYF LKGTDLAEHS QATLNEVARQ LNSRPRKTLD YETPAERFSQ SVASTG
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