Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2512 |
Symbol | |
ID | 3712202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2867998 |
End bp | 2869425 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_348243 |
Protein GI | 77458737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG CAACAATCGG ACAGGCTTAT AACTACAAGG TCGTCCGCCA ATTCGTCATC GCGACTGTTT TCTGGGGTGT CGTGGGCATG GCGATGGGGG TATGGATCGC CTCGCAACTG GTATGGCCGG AGATGAATCT GGACTTGCCG TGGACCACCT TCGGCCGCTT GCGACCGTTG CACACCAGCC TGGTGATTTT CGGTTTCGCC GGCAGCGCGC AATTCGCCGC CAGTTACTAC GCCGTGCAGC GTACCTGCCA GGTGCGGCTG TACTCGGACA AGCTCGCCGC CTTCACCTTC TGGGGCTGGC AATCGGTGAT CGTGATCATG CTGGTCACCC TGCCGATGGG CTACACCACC ACCAAGGAAT ACGCCGAGAT CGAATTCTCC GGCGCCGTTT GGATGGCGGT GGTCTGGGTC GCGTACGCCA TCGTGTTCTT CACCACCGTG GTGCAGCGCA AAACCAAGCA CATCTACGTC GGCAACTGGT TCTTCGGCGC GTTCATTCTG GTGATCGCCA TGCTCCACGT GGTCAATCAC CTGTCGATCC CGGTGGACTG GTTCAAGTCT TATCCGGTGT ACTCCGGCGC CACCGACGCC ATGGTGCAGT GGTGGTACGG GCACAACGCG GTGGGGTTCT TCCTGACCAC CGGGTTCCTC GGGATGATGT ATTACTTCGT GCCCAAGCAA GTGAATCGGC CGGTGTATTC GTACCGGTTG TCGATCGTGC ACTTCTGGGC GCTGATCACC CTGTACATCT GGGCCGGCCC GCACCATTTG CATTACACCG CGCTACCGGA CTGGGCGCAG TCGCTGGGCA TGGCGATGTC GCTGATCCTG CTGGCACCGA GCTGGGGCGG GATGATCAAC GGGATGATGA CCCTGTCGGG CGCCTGGCAT AAATTGCGCA CCGACCCGAT CCTGCGCTTC CTGGTTCTGT CGCTGGCGTT CTACGGCATG TCGACGTTCG AAGGGCCGAT GATGGCGATC AAGACCGTCA ATGCCCTCTC CCACTACACC GACTGGACCA TCGGCCACGT CCACGCCGGG GCGCTGGGCT GGGTGGCGAT GATCACCTTC GGCGCAACCT ATCACATGGT GCCCAAGGTG TTTGGCCGCG AGCGCATGCA CAGTACGCCG CTGATCAACC TGCACTTCTG GCTGGCGACC ATTGGCACGG TGTTGTACAT CGCTTCGATG TGGGTCAACG GCATTACTCA GGGCCTGATG TGGCGGGCGA TCAACGAGGA CGGCACGCTG ACTTATTCGT TCGTCGAAGC GCTGCAGGCC AGTCATCCGG GGTTTGTCGT ACGGTTTGCC GGCGGGGTGT TCTTTCTCAG CGGCATGTTG CTGATGGCCT ACAACGTGTG GCGCACGGTG CGGGTTGCCG ACGTTGCACT CGCCCACCGT GAAGCGCAGA TCGCCTGA
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Protein sequence | MSTATIGQAY NYKVVRQFVI ATVFWGVVGM AMGVWIASQL VWPEMNLDLP WTTFGRLRPL HTSLVIFGFA GSAQFAASYY AVQRTCQVRL YSDKLAAFTF WGWQSVIVIM LVTLPMGYTT TKEYAEIEFS GAVWMAVVWV AYAIVFFTTV VQRKTKHIYV GNWFFGAFIL VIAMLHVVNH LSIPVDWFKS YPVYSGATDA MVQWWYGHNA VGFFLTTGFL GMMYYFVPKQ VNRPVYSYRL SIVHFWALIT LYIWAGPHHL HYTALPDWAQ SLGMAMSLIL LAPSWGGMIN GMMTLSGAWH KLRTDPILRF LVLSLAFYGM STFEGPMMAI KTVNALSHYT DWTIGHVHAG ALGWVAMITF GATYHMVPKV FGRERMHSTP LINLHFWLAT IGTVLYIASM WVNGITQGLM WRAINEDGTL TYSFVEALQA SHPGFVVRFA GGVFFLSGML LMAYNVWRTV RVADVALAHR EAQIA
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