Gene Pfl01_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2303 
Symbol 
ID3715586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2655445 
End bp2656761 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content60% 
IMG OID 
Productxylose isomerase 
Protein accessionYP_348035 
Protein GI77458530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.618327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTACT TCCCCGATAT CGAGCGGATC CGCTACGAAG GTCCTGCCAG CGATTCTCCA 
CTTGCCTTCC GCCACTACGA CGCCGACAAG ATCATCCTCG GCAAGCCCAT GCGCGAACAT
CTGCGCATGG CCGCCTGTTA TTGGCACACC TTTGTCTGGC CGGGCTCCGA CGTGTTCGGC
GCCGGGACGT TCAAGCGCCC GTGGCAACAC GCCGGTGACC CGATGGAGCT GGCCATCGGC
AAGGCGCAGG CCGCGTTCGA GTTTTTCTCC AAGCTGGGTA TCGATTACTA CTGCTTTCAT
GACACGGATG TCGCCCCCGA AGGCAATTCG CTGAAGGAGT ACCGCAACCA CTTCGCACAG
ATGATCGATC ACCTGGAACG CCATCAGGAA GAAAGCGGGA TCAAGCTGCT GTGGGGCACC
GCCAACTGCT TCAGCAATCC GCGCTTTGCC GCCGGTGCCG CCAGCAACCC GGATCCTGAA
GTGTTCGCCT GCGCTGCCGC CCAGGTCTTC AGCGCCATGA ACGCCACTCA ACGCCTCAAG
GGCGCCAACT ATGTGTTGTG GGGCGGTCGC GAGGGCTACG AAACCCTGCT CAACACCGAC
TTGAAACGCG AGCGCGAACA ACTGGGCCGC TTCATGCGCA TGGTGGTCGA GCACAAATAC
AAGATCGGCT TCAAAGGTGA CCTGCTGATC GAGCCCAAAC CGCAGGAACC GACCAAGCAC
CAGTACGATT ACGACAGCGC CACCGTGTTC GGTTTTCTCC AGCAGTTCGG TCTGGAAAAG
GAAATCAAGG TCAACATCGA GGCCAACCAC GCCACTCTGG CCGGTCATAG TTTTCATCAC
GAAGTGGCGA CGGCCGTCTC GCTGGGGATT TTCGGCAGCA TCGACGCCAA CCGGGGCGAC
CCGCAAAACG GCTGGGACAC CGATCAATTC CCCAACAGCG TCGAGGAAAT GACCCTCGTC
ACTTATGAAA TCCTCAAGGC CGGCGGGTTC GGCAATGGCG GGTTCAACTT CGATTCCAAG
GTGCGCCGCC AGAGCCTCGA TGAGACCGAT CTGTTCCACG GTCACGTCGG TGCCATGGAC
GTCCTCGCCC TGTCGCTCGA GCGGGCCGCC GCCATGGTCC AGAACGATCA GCTGCAACGG
CTCAAGGACC AACGCTATGC CGGCTGGCAG CAGCCCTTCG GCCAGTCGGT GCTGGCAGGC
GACTTCAATC TCCAGTCCCT GGCCGAGCAC GCCTTTGCCA ACGAATTGAA CCCACAGGCC
GTCAGCGGTC GGCAGGAAAT GCTCGAAAAC GTCGTCAACC GGTTTATCTA TCGCTGA
 
Protein sequence
MPYFPDIERI RYEGPASDSP LAFRHYDADK IILGKPMREH LRMAACYWHT FVWPGSDVFG 
AGTFKRPWQH AGDPMELAIG KAQAAFEFFS KLGIDYYCFH DTDVAPEGNS LKEYRNHFAQ
MIDHLERHQE ESGIKLLWGT ANCFSNPRFA AGAASNPDPE VFACAAAQVF SAMNATQRLK
GANYVLWGGR EGYETLLNTD LKREREQLGR FMRMVVEHKY KIGFKGDLLI EPKPQEPTKH
QYDYDSATVF GFLQQFGLEK EIKVNIEANH ATLAGHSFHH EVATAVSLGI FGSIDANRGD
PQNGWDTDQF PNSVEEMTLV TYEILKAGGF GNGGFNFDSK VRRQSLDETD LFHGHVGAMD
VLALSLERAA AMVQNDQLQR LKDQRYAGWQ QPFGQSVLAG DFNLQSLAEH AFANELNPQA
VSGRQEMLEN VVNRFIYR