Gene Pfl01_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1880 
Symbol 
ID3716331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2145463 
End bp2146296 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID 
Producthydrolase, putative 
Protein accessionYP_347612 
Protein GI77458107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TGAAGTGGGT TCGCGGCGTT AATGGCACCT TGGGCTGGTT CGCACCGAAA 
CTGGTGGCGA GCAAAATGCG GTTGGCGTTC ATGACGCCGC GCGCGAATAC ACCGCGCGAT
TGGGAATTGC CGCTGCTGGC GAAATCCGAA CGCATCACTT TGCGCTTCGG TCTTTCGGCC
CTGCGCTGGG GGCAAGGCCC GACTGTTTTG CTGATGCATG GCTGGGAAGG GCGCCCCACC
CAGTTTGCCG CGTTGATCAC TGCGCTGGTC GAAGCGGGCT ACACCGTTGT CGCGCTGGAT
GGTCCGGCCC ACGGTCGCTC GCCGGGGCGT GAAGCCAACG TGGTGCTGTT CGCCCGTGCG
ATGCTTGAGG CCGCGGCCGA ATTGCCGCCG TTGCAAGCGG TCATCGGCCA CTCCATGGGC
GGTGCCAGTG CCATGCTCGC GGTGCAATTG GGCTTGCGCA CTGAAACCCT GGTGAGCATC
GCCGCTCCCG CGCGAATTCT CGGGGTGCTG CGCGGATTTG CCCGCTACGT CGGCATGCCG
CCCAGAGCTC GTTCCGCGTT CATTCGCGAG GTTGAACAGG ACGTCGGCAT GCGCGCCGCC
ACCCTCGATG TCGCCCACTA TCAACTGGAT ATGCCAGGCC TGATCGTGCA TGCCGAGGAC
GACACGTTCG TTTCGGTCAA GGAATCCCAA TTGATCCACG AATCCTGGTT CGACAGTCGC
TTGCTGCGCC TGGAGGCCGG CGGCCATCAA CGCGTACTGG CCGACCCTCG GGTGATTGAT
GGCGTGTTAT CACTGCTGGC CGGGCGCAGC CTTCAGGCGC GGCAATCGGC CTAG
 
Protein sequence
MSTLKWVRGV NGTLGWFAPK LVASKMRLAF MTPRANTPRD WELPLLAKSE RITLRFGLSA 
LRWGQGPTVL LMHGWEGRPT QFAALITALV EAGYTVVALD GPAHGRSPGR EANVVLFARA
MLEAAAELPP LQAVIGHSMG GASAMLAVQL GLRTETLVSI AAPARILGVL RGFARYVGMP
PRARSAFIRE VEQDVGMRAA TLDVAHYQLD MPGLIVHAED DTFVSVKESQ LIHESWFDSR
LLRLEAGGHQ RVLADPRVID GVLSLLAGRS LQARQSA